RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 DCAF6Q58WW2 860 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 IER5LQ5T953 404 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 XYLT1Q86Y38 959 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 SLC30A5Q8TAD4 765 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 FAM3CQ92520 227 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 SERPINB11Q96P15 392 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 DDX23Q9BUQ8 820 aaKnown RBP24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 WDR35Q9P2L0 1181 aa24.1■■□□□ 1.45
SMARCB1-205ENST00000417137 SPECC1L-ADORA2AF8WAN1 911 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 GREM1O60565 184 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 ADH1CP00326 375 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 CALB1P05937 261 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 CLCN5P51795 746 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 CDK17Q00537 523 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 NNTQ13423 1086 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 TAF5Q15542 800 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 TRIP4Q15650 581 aaPredicted RBP24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 TSR1Q2NL82 804 aaKnown RBP24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 MMS22LQ6ZRQ5 1243 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 VPS36Q86VN1 386 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 PHF13Q86YI8 300 aaPredicted RBP24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 UNC45BQ8IWX7 931 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 BBS7Q8IWZ6 715 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 DEFB106AQ8N104 65 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 DQX1Q8TE96 717 aaKnown RBP24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 SLC2A13Q96QE2 648 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 RRN3Q9NYV6 651 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 ADAM22Q9P0K1 906 aa24.09■■□□□ 1.45
SMARCB1-205ENST00000417137 SCAMP3O14828 347 aaKnown RBP24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 NCAM2O15394 837 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 PDGFBP01127 241 aaPredicted RBP24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 SERPING1P05155 500 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 CORO1AP31146 461 aaKnown RBP24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 GBP1P32455 592 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 CTHP32929 405 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 CHKAP35790 457 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 TBX4P57082 545 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 RING1Q06587 406 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 DHCR24Q15392 516 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 TDRD12Q587J7 1177 aaKnown RBP24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 FAM102AQ5T9C2 384 aaPredicted RBP24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 SYPL2Q5VXT5 272 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 NUGGCQ68CJ6 796 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 ASTLQ6HA08 431 aaPredicted RBP24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 ACAD10Q6JQN1 1059 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 Q6ZNB5 142 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 WBP2Q969T9 261 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 PIWIL1Q96J94 861 aaKnown RBP24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 C11orf70Q9BRQ4 267 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 SYT11Q9BT88 431 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 OSBPL6Q9BZF3 934 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 TMEM51Q9NW97 253 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 TLR6Q9Y2C9 796 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 SIT1Q9Y3P8 196 aa24.08■■□□□ 1.45
SMARCB1-205ENST00000417137 OTOL1A6NHN0 477 aaPredicted RBP24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 DAB1O75553 588 aa24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 GRAP2O75791 330 aa24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 SKILP12757 684 aa24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 NOS2P35228 1153 aa24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 SOX9P48436 509 aa24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 RNASE9P60153 205 aaKnown RBP24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 C1QBPQ07021 282 aaKnown RBP24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 UBXN2BQ14CS0 331 aa24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 E4F1Q66K89 784 aaPredicted RBP24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 ZNF571Q7Z3V5 609 aaPredicted RBP24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 OR8K1Q8NGG5 319 aa24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 ZNHIT6Q9NWK9 470 aaKnown RBP24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 TECTAO75443 2155 aa24.07■■□□□ 1.44
SMARCB1-205ENST00000417137 FAM170AA1A519 330 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 FAM170BA6NMN3 283 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 GOLGA8SH3BPF8 625 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 MSI1O43347 362 aaKnown RBP24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 TRUB2O95900 331 aaKnown RBP24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 KLKB1P03952 638 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 CYP17A1P05093 508 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 GZMAP12544 262 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 CD72P21854 359 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 GJA4P35212 333 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 MATKP42679 507 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 GAD2Q05329 585 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 C2CD6Q53TS8 623 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 RHBDF2Q6PJF5 856 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 ARCQ7LC44 396 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 DENND1CQ8IV53 801 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 DRC7Q8IY82 874 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 LTB4R2Q9NPC1 389 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 SPHK2Q9NRA0 654 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 AGO1Q9UL18 857 aaKnown RBP24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 STAP1Q9ULZ2 295 aa24.06■■□□□ 1.44
SMARCB1-205ENST00000417137 AP5Z1O43299 807 aa24.05■■□□□ 1.44
SMARCB1-205ENST00000417137 LATS1O95835 1130 aa24.05■■□□□ 1.44
SMARCB1-205ENST00000417137 AOC1P19801 751 aa24.05■■□□□ 1.44
SMARCB1-205ENST00000417137 SLC11A2P49281 568 aa24.05■■□□□ 1.44
SMARCB1-205ENST00000417137 LY6G5CQ5SRR4 150 aa24.05■■□□□ 1.44
SMARCB1-205ENST00000417137 TAC4Q86UU9 113 aa24.05■■□□□ 1.44
SMARCB1-205ENST00000417137 VCPIP1Q96JH7 1222 aa24.05■■□□□ 1.44
SMARCB1-205ENST00000417137 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.05■■□□□ 1.44
SMARCB1-205ENST00000417137 FAM204AQ9H8W3 233 aa24.05■■□□□ 1.44
SMARCB1-205ENST00000417137 HELZP42694 1942 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms