RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TCRBV21S2A2A0A5A6 115 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 TBC1D3BA6NDS4 549 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 CISD3P0C7P0 127 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 ZNF806P0C7X5 589 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 BRD2P25440 801 aaKnown RBP15.84■□□□□ 0.13
UBXN4-203ENST00000416538 CORO1AP31146 461 aaKnown RBP15.84■□□□□ 0.13
UBXN4-203ENST00000416538 PLA2G4AP47712 749 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 ZNF132P52740 706 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 STIM1Q13586 685 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 NUMA1Q14980 2115 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 HSF5Q4G112 596 aaPredicted RBP15.84■□□□□ 0.13
UBXN4-203ENST00000416538 FYB2Q5VWT5 728 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 BTBD8Q5XKL5 378 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 TMEM270Q6UE05 265 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 CCDC26Q8TAB7 109 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 HMGB4Q8WW32 186 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 NT5C1BQ96P26 610 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 RTKNQ9BST9 563 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 GTPBP4Q9BZE4 634 aaKnown RBP15.84■□□□□ 0.13
UBXN4-203ENST00000416538 CD93Q9NPY3 652 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 MBD1Q9UIS9 605 aaPredicted RBP15.84■□□□□ 0.13
UBXN4-203ENST00000416538 CLEC4EQ9ULY5 219 aa15.84■□□□□ 0.13
UBXN4-203ENST00000416538 YJEFN3A6XGL0 299 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 E7ENQ6 273 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 ZBED1O96006 694 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 PENKP01210 267 aaPredicted RBP15.83■□□□□ 0.12
UBXN4-203ENST00000416538 RALAP11233 206 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 VDRP11473 427 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 TBXAS1P24557 533 aaPredicted RBP15.83■□□□□ 0.12
UBXN4-203ENST00000416538 GBP1P32455 592 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 P2RY2P41231 377 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 MARSP56192 900 aaKnown RBP15.83■□□□□ 0.12
UBXN4-203ENST00000416538 GOLGA8FQ08AF8 430 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 GOLGA8DPQ0D2H9 430 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 PAK1Q13153 545 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 MAP7D1Q3KQU3 841 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 EOGTQ5NDL2 527 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 KIAA1211LQ6NV74 962 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 RRAGAQ7L523 313 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 PPM1KQ8N3J5 372 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 MARCH2Q9P0N8 246 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 AGO1Q9UL18 857 aaKnown RBP15.83■□□□□ 0.12
UBXN4-203ENST00000416538 CIZ1Q9ULV3 898 aaPredicted RBP15.83■□□□□ 0.12
UBXN4-203ENST00000416538 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.83■□□□□ 0.12
UBXN4-203ENST00000416538 STARD13Q9Y3M8 1113 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 PCDHGA5Q9Y5G8 931 aa15.83■□□□□ 0.12
UBXN4-203ENST00000416538 SLC12A8A0AV02 714 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 BCLAF3A2AJT9 711 aaKnown RBP15.82■□□□□ 0.12
UBXN4-203ENST00000416538 PATE3B3GLJ2 98 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 PIK3R2O00459 728 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 MSI1O43347 362 aaKnown RBP15.82■□□□□ 0.12
UBXN4-203ENST00000416538 GABRG2P18507 467 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 PPP1R2P41236 205 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 RGS7P49802 495 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 DAOAP59103 153 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 CREB5Q02930 508 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 ELF2Q15723 593 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 AASDHQ4L235 1098 aaPredicted RBP15.82■□□□□ 0.12
UBXN4-203ENST00000416538 PMF1Q6P1K2 205 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 LCLAT1Q6UWP7 414 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 DENND1CQ8IV53 801 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 FAM217AQ8IXS0 508 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 RBBP8NLQ8NC74 664 aaPredicted RBP15.82■□□□□ 0.12
UBXN4-203ENST00000416538 CLEC4CQ8WTT0 213 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 EDEM1Q92611 657 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 SLC6A17Q9H1V8 727 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 SFMBT1Q9UHJ3 866 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 FBXO10Q9UK96 956 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 PCDHB4Q9Y5E5 795 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 RAD54BQ9Y620 910 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 CACNA1EQ15878 2313 aa15.82■□□□□ 0.12
UBXN4-203ENST00000416538 GFRA2O00451 464 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 PAEPP09466 180 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 SETSIPP0DME0 302 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 HOXB2P14652 356 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 DGKGP49619 791 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 MFAP3P55082 362 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 YWHAEP62258 255 aaKnown RBP15.81■□□□□ 0.12
UBXN4-203ENST00000416538 APBA1Q02410 837 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 KCNH2Q12809 1159 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 TRIP4Q15650 581 aaPredicted RBP15.81■□□□□ 0.12
UBXN4-203ENST00000416538 CAMK4Q16566 473 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 GEN1Q17RS7 908 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 USP39Q53GS9 565 aaKnown RBP15.81■□□□□ 0.12
UBXN4-203ENST00000416538 RSRC2Q7L4I2 434 aaKnown RBP15.81■□□□□ 0.12
UBXN4-203ENST00000416538 FMNL3Q8IVF7 1028 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 SLC35F5Q8WV83 523 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 KCTD13Q8WZ19 329 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 SRRTQ9BXP5 876 aaKnown RBP15.81■□□□□ 0.12
UBXN4-203ENST00000416538 DNAI2Q9GZS0 605 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 INTS2Q9H0H0 1204 aaKnown RBP15.81■□□□□ 0.12
UBXN4-203ENST00000416538 LRRC4Q9HBW1 653 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 CACNA2D2Q9NY47 1150 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 CALCOCO1Q9P1Z2 691 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 WDR35Q9P2L0 1181 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 HESX1Q9UBX0 185 aa15.81■□□□□ 0.12
UBXN4-203ENST00000416538 TP53BP1Q12888 1972 aaPredicted RBP15.8■□□□□ 0.12
UBXN4-203ENST00000416538 LNP1A1A4G5 178 aa15.8■□□□□ 0.12
UBXN4-203ENST00000416538 BICDL2A1A5D9 508 aa15.8■□□□□ 0.12
UBXN4-203ENST00000416538 WASH3PC4AMC7 463 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms