RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 VPS16Q9H269 839 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TFB2MQ9H5Q4 396 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 MVB12BQ9H7P6 319 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 CERS4Q9HA82 394 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 C12orf10Q9HB07 376 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 LY9Q9HBG7 655 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 PREBQ9HCU5 417 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 MID1IP1Q9NPA3 183 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SNTG1Q9NSN8 517 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 NINJ2Q9NZG7 142 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 AKAP7Q9P0M2 348 aaPredicted RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 GRHPRQ9UBQ7 328 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 ADD3Q9UEY8 706 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 RPS6KA6Q9UK32 745 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 TLK1Q9UKI8 766 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 AURKCQ9UQB9 309 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 PIN4Q9Y237 131 aaKnown RBP3.81□□□□□ -1.8
SF3B1-203ENST00000414174 PCDHGA1Q9Y5H4 931 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 DMRT1Q9Y5R6 373 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 COMMD3-BMI1R4GMX3 469 aa3.81□□□□□ -1.8
SF3B1-203ENST00000414174 SBNO1A3KN83 1393 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ROCK2O75116 1388 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TDRD9Q8NDG6 1382 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PLEKHG2Q9H7P9 1386 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 hCG_1807616A0A1W2PRN6 198 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 XKRY2A2RUG3 117 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 EME2A4GXA9 379 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CCDC151A5D8V7 595 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TMEM247A6NEH6 219 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CAPN8A6NHC0 703 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF879B4DU55 563 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 F8W810 466 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 H3BQV1 296 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 GOLGA8MH3BSY2 632 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 H7BY64 318 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 O00370 1275 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PSMA7O14818 248 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PER2O15055 1255 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ADAMTS3O15072 1205 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 SLC25A17O43808 307 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CACNG3O60359 315 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ULK1O75385 1050 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PRAMEF1O95521 474 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CRTAMO95727 393 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PNPP00491 289 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 IFNB1P01574 187 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 HLA-DRAP01903 254 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 FESP07332 822 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 IVLP07476 585 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ASNSP08243 561 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ALOX5P09917 674 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 WEE2P0C1S8 567 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ACRP10323 421 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TXNP10599 105 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PYGMP11217 842 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 MYL4P12829 197 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 RARGP13631 454 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 GLRA2P23416 452 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TNFSF4P23510 183 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 AKAP5P24588 427 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PDIA3P30101 505 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 L1CAMP32004 1257 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CCR1P32246 355 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ADRA1BP35368 520 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TECP42680 631 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ARCN1P48444 511 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 HSPA13P48723 471 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 DHPSP49366 369 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 TUFMP49411 452 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 RAD23AP54725 363 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ARF3P61204 181 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ABATP80404 500 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ARF1P84077 181 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ZXDAP98168 799 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 MAP4K2Q12851 820 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 RALGDSQ12967 914 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CHIT1Q13231 466 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ITGA7Q13683 1181 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PTK2BQ14289 1009 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 RAB3GAP1Q15042 981 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ZNF827Q17R98 1081 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 FAM110CQ1W6H9 321 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 RGS21Q2M5E4 152 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CCDC153Q494R4 210 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 HSP90AA5PQ58FG0 334 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PPP6R3Q5H9R7 873 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 MDH1BQ5I0G3 518 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 FBXO47Q5MNV8 452 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 RBM20Q5T481 1227 aaKnown RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 C1orf185Q5T7R7 199 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 C12orf60Q5U649 245 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 CES4AQ5XG92 561 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 SLC25A24Q6NUK1 477 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 JMJD6Q6NYC1 403 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 PGBD2Q6P3X8 592 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 ERICH5Q6P6B1 374 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 BORAQ6PGQ7 559 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 APOA5Q6Q788 366 aa3.8□□□□□ -1.8
SF3B1-203ENST00000414174 C6orf15Q6UXA7 325 aaPredicted RBP3.8□□□□□ -1.8
SF3B1-203ENST00000414174 GK5Q6ZS86 529 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms