RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 AGO1Q9UL18 857 aaKnown RBP12.51□□□□□ -0.41
NEDD1-202ENST00000411739 SLC9A3R1O14745 358 aaPredicted RBP12.5□□□□□ -0.41
NEDD1-202ENST00000411739 GJB6O95452 261 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 HOXC13P31276 330 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 PBX1P40424 430 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 YWHAZP63104 245 aaKnown RBP12.5□□□□□ -0.41
NEDD1-202ENST00000411739 NOMO3P69849 1222 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 DCAF6Q58WW2 860 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 MMS22LQ6ZRQ5 1243 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 IRF2BP2Q7Z5L9 587 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 DEFB106AQ8N104 65 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 ZNF276Q8N554 614 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 POLR3BQ9NW08 1133 aaPredicted RBP12.5□□□□□ -0.41
NEDD1-202ENST00000411739 TBC1D14Q9P2M4 693 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 TSPAN3O60637 253 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 EGFP01133 1207 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 CHRNB1P11230 501 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 CDH5P33151 784 aaPredicted RBP12.5□□□□□ -0.41
NEDD1-202ENST00000411739 NR1H3Q13133 447 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 FSTL4Q6MZW2 842 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 OLFML1Q6UWY5 402 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 Q6ZNB5 142 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 TAC4Q86UU9 113 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 DTWD2Q8NBA8 298 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
NEDD1-202ENST00000411739 C18orf8Q96DM3 657 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 AGPAT1Q99943 283 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 TTYH3Q9C0H2 523 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 SPHK2Q9NRA0 654 aa12.5□□□□□ -0.41
NEDD1-202ENST00000411739 OLA1Q9NTK5 396 aaKnown RBP12.5□□□□□ -0.41
NEDD1-202ENST00000411739 MRPS17Q9Y2R5 130 aaKnown RBP12.5□□□□□ -0.41
NEDD1-202ENST00000411739 GOLGA6L7A0A1B0GV03 622 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 NEDD8-MDP1E9PL57 170 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 AP5Z1O43299 807 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 ADH5P11766 374 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 OPRD1P41143 372 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 SLC6A3Q01959 620 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 KDSRQ06136 332 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 GAS2L3Q86XJ1 694 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 PRSS33Q8NF86 280 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 EZH1Q92800 747 aaPredicted RBP12.49□□□□□ -0.41
NEDD1-202ENST00000411739 P2RY13Q9BPV8 354 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 C11orf70Q9BRQ4 267 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 RBSNQ9H1K0 784 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 POPDC2Q9HBU9 364 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 ZDHHC4Q9NPG8 344 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 C2orf42Q9NWW7 574 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 KMT2EQ8IZD2 1858 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 TMCO5BA8MYB1 307 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 H0Y858 1186 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 CYP1A1P04798 512 aaPredicted RBP12.49□□□□□ -0.41
NEDD1-202ENST00000411739 FERP16591 822 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 TFE3P19532 575 aaPredicted RBP12.49□□□□□ -0.41
NEDD1-202ENST00000411739 TBX4P57082 545 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 GAS6Q14393 721 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 ASIC2Q16515 512 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 SFMBT2Q5VUG0 894 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 PKN3Q6P5Z2 889 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 XYLT1Q86Y38 959 aa12.49□□□□□ -0.41
NEDD1-202ENST00000411739 SART1O43290 800 aaKnown RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 MOCS2O96007 188 aaPredicted RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 SEC13P55735 322 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 MTAPQ13126 283 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 TRIP4Q15650 581 aaPredicted RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 TMEM196Q5HYL7 178 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 FAM102AQ5T9C2 384 aaPredicted RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 MSANTD2Q6P1R3 559 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 ZNF677Q86XU0 584 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 CD101Q93033 1021 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 NELL2Q99435 816 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 BBS2Q9BXC9 721 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 HAUS4Q9H6D7 363 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 SPATA6Q9NWH7 488 aaPredicted RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 TAS2R14Q9NYV8 317 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 XPO7Q9UIA9 1087 aaKnown RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 DAAM1Q9Y4D1 1078 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 CACNA1IQ9P0X4 2223 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 LSM8O95777 96 aaKnown RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 TRUB2O95900 331 aaKnown RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 ADH1CP00326 375 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 HARS2P49590 506 aaKnown RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 MLLT6P55198 1093 aaPredicted RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 GRSF1Q12849 480 aaKnown RBP eCLIP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 NME3Q13232 169 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 ZC3H12AQ5D1E8 599 aaKnown RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 EFHC1Q5JVL4 640 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 RFWD3Q6PCD5 774 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 TSSK4Q6SA08 328 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 OLIG1Q8TAK6 271 aa12.48□□□□□ -0.41
NEDD1-202ENST00000411739 HBS1LQ9Y450 684 aaKnown RBP12.48□□□□□ -0.41
NEDD1-202ENST00000411739 UNGP13051 313 aaPredicted RBP12.47□□□□□ -0.41
NEDD1-202ENST00000411739 GABRB2P47870 512 aa12.47□□□□□ -0.41
NEDD1-202ENST00000411739 GAD2Q05329 585 aa12.47□□□□□ -0.41
NEDD1-202ENST00000411739 TCF15Q12870 199 aa12.47□□□□□ -0.41
NEDD1-202ENST00000411739 CCINQ13939 588 aa12.47□□□□□ -0.41
NEDD1-202ENST00000411739 CLEC16AQ2KHT3 1053 aa12.47□□□□□ -0.41
NEDD1-202ENST00000411739 EMC10Q5UCC4 262 aa12.47□□□□□ -0.41
NEDD1-202ENST00000411739 TRNP1Q6NT89 227 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms