RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 SLC4A11Q8NBS3 891 aa14.88□□□□□ -0.03
MINDY4-202ENST00000409881 SLC20A1Q8WUM9 679 aa14.88□□□□□ -0.03
MINDY4-202ENST00000409881 TMEM176AQ96HP8 235 aa14.88□□□□□ -0.03
MINDY4-202ENST00000409881 SERPINB12Q96P63 405 aa14.88□□□□□ -0.03
MINDY4-202ENST00000409881 PITPNM3Q9BZ71 974 aa14.88□□□□□ -0.03
MINDY4-202ENST00000409881 ZCWPW1Q9H0M4 648 aa14.88□□□□□ -0.03
MINDY4-202ENST00000409881 DPEP3Q9H4B8 488 aa14.88□□□□□ -0.03
MINDY4-202ENST00000409881 FAM124BQ9H5Z6 455 aaPredicted RBP14.88□□□□□ -0.03
MINDY4-202ENST00000409881 CYP11A1P05108 521 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 TYMPP19971 482 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 TNFAIP3P21580 790 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 CHKAP35790 457 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 COILP38432 576 aaPredicted RBP14.87□□□□□ -0.03
MINDY4-202ENST00000409881 LHX1P48742 406 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 BPIFB4P59827 614 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 YWHAHQ04917 246 aaPredicted RBP14.87□□□□□ -0.03
MINDY4-202ENST00000409881 PPP1R15BQ5SWA1 713 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 NOP9Q86U38 636 aaKnown RBP14.87□□□□□ -0.03
MINDY4-202ENST00000409881 UNC93AQ86WB7 457 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 EPS8L1Q8TE68 723 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 CLP1Q92989 425 aaKnown RBP14.87□□□□□ -0.03
MINDY4-202ENST00000409881 HEXIM2Q96MH2 286 aaKnown RBP14.87□□□□□ -0.03
MINDY4-202ENST00000409881 PAIP2Q9BPZ3 127 aaKnown RBP14.87□□□□□ -0.03
MINDY4-202ENST00000409881 LRMDAQ9H2I8 198 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 KIAA1671Q9BY89 1806 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 LINC01553A4QN01 128 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 GABRDO14764 452 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 SYN3O14994 580 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 THAP12O43422 761 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 CA3P07451 260 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 LINC00271P0C7V0 271 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 TAC1P20366 129 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 CTNNB1P35222 781 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 PPM1AP35813 382 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 PTDSS1P48651 473 aaKnown RBP14.87□□□□□ -0.03
MINDY4-202ENST00000409881 PSMC1P62191 440 aaKnown RBP14.87□□□□□ -0.03
MINDY4-202ENST00000409881 PARP6Q2NL67 630 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 RNF220Q5VTB9 566 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 ZNF449Q6P9G9 518 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 TRMT10CQ7L0Y3 403 aaKnown RBP14.87□□□□□ -0.03
MINDY4-202ENST00000409881 TAS1R1Q7RTX1 841 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 LONP2Q86WA8 852 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 MAGEB18Q96M61 343 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 VN1R3Q9BXE9 311 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 DLGAP2Q9P1A6 1054 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 CTTNBP2NLQ9P2B4 639 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 MTUS1Q9ULD2 1270 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 PDE4DIPQ5VU43 2346 aa14.87□□□□□ -0.03
MINDY4-202ENST00000409881 CARNS1A5YM72 827 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 ENTPD5O75356 428 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 ARHGEF15O94989 841 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 RTN3O95197 1032 aaPredicted RBP14.86□□□□□ -0.03
MINDY4-202ENST00000409881 FAM163BP0C2L3 166 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 PYGMP11217 842 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 FGFR3P22607 806 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 EPHB2P29323 1055 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 SSTR3P32745 418 aaPredicted RBP14.86□□□□□ -0.03
MINDY4-202ENST00000409881 KLC1Q07866 573 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 CCDC15Q0P6D6 951 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 CALCOCO2Q13137 446 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 VARS2Q5ST30 1063 aaKnown RBP14.86□□□□□ -0.03
MINDY4-202ENST00000409881 CPNE8Q86YQ8 564 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 SRRM1Q8IYB3 904 aaKnown RBP14.86□□□□□ -0.03
MINDY4-202ENST00000409881 UBL4BQ8N7F7 174 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 LPIN3Q9BQK8 851 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 ZSWIM1Q9BR11 485 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 NOCTQ9UK39 431 aaKnown RBP14.86□□□□□ -0.03
MINDY4-202ENST00000409881 CHKBQ9Y259 395 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 FGF18O76093 207 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 SP100P23497 879 aaPredicted RBP14.86□□□□□ -0.03
MINDY4-202ENST00000409881 ATP5DP30049 168 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 PBX2P40425 430 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 MESDQ14696 234 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 SETDB1Q15047 1291 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 CLUL1Q15846 466 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 KYNUQ16719 465 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 RTP2Q5QGT7 225 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 SEL1L2Q5TEA6 688 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 SPRED2Q7Z698 418 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 THEM5Q8N1Q8 247 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 AGGF1Q8N302 714 aaeCLIP14.86□□□□□ -0.033e-6■■□□□ 12.8
MINDY4-202ENST00000409881 GALNT15Q8N3T1 639 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 C12orf29Q8N999 325 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 UCMAQ8WVF2 138 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 DNAJC9Q8WXX5 260 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 C17orf80Q9BSJ5 609 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 SYT11Q9BT88 431 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 TTPALQ9BTX7 342 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 TBC1D10AQ9BXI6 508 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 FAM49BQ9NUQ9 324 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 YBX2Q9Y2T7 364 aaKnown RBP14.86□□□□□ -0.03
MINDY4-202ENST00000409881 ASB3Q9Y575 518 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 PCDHA11Q9Y5I1 949 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 TSC2P49815 1807 aa14.86□□□□□ -0.03
MINDY4-202ENST00000409881 ANKRD62A6NC57 917 aa14.85□□□□□ -0.03
MINDY4-202ENST00000409881 E7ENQ6 273 aa14.85□□□□□ -0.03
MINDY4-202ENST00000409881 PCSK1P29120 753 aa14.85□□□□□ -0.03
MINDY4-202ENST00000409881 SESN3P58005 492 aa14.85□□□□□ -0.03
MINDY4-202ENST00000409881 LBRQ14739 615 aaKnown RBP14.85□□□□□ -0.03
MINDY4-202ENST00000409881 CCDC142Q17RM4 750 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms