RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 AMHP03971 560 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 RARGP13631 454 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 PECAM1P16284 738 aaPredicted RBP14.65□□□□□ -0.06
LIMS2-206ENST00000409754 TGM2P21980 687 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 L1CAMP32004 1257 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 RDXP35241 583 aaKnown RBP14.65□□□□□ -0.06
LIMS2-206ENST00000409754 ATXN1P54253 815 aaKnown RBP14.65□□□□□ -0.06
LIMS2-206ENST00000409754 NOMO1Q15155 1222 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 IZUMO3Q5VZ72 239 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 SLC9A4Q6AI14 798 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 PM20D1Q6GTS8 502 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 NPAS4Q8IUM7 802 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 PQLC3Q8N755 202 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 SP7Q8TDD2 431 aaPredicted RBP14.65□□□□□ -0.06
LIMS2-206ENST00000409754 TMEM121Q9BTD3 319 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 RHOBTB2Q9BYZ6 727 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 MTIF3Q9H2K0 278 aaKnown RBP14.65□□□□□ -0.06
LIMS2-206ENST00000409754 PABPC3Q9H361 631 aaKnown RBP14.65□□□□□ -0.06
LIMS2-206ENST00000409754 NRDE2Q9H7Z3 1164 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 RRN3Q9NYV6 651 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 CALCOCO1Q9P1Z2 691 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 VPS18Q9P253 973 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 SAE1Q9UBE0 346 aaPredicted RBP14.65□□□□□ -0.06
LIMS2-206ENST00000409754 AP4E1Q9UPM8 1137 aa14.65□□□□□ -0.06
LIMS2-206ENST00000409754 PRG3Q9Y2Y8 225 aaPredicted RBP14.65□□□□□ -0.06
LIMS2-206ENST00000409754 YJEFN3A6XGL0 299 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 E7ENQ6 273 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 SGK1O00141 431 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 DNALI1O14645 258 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-206ENST00000409754 APOL1O14791 398 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 LTFP02788 710 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 FYNP06241 537 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 USP17L7P0C7H9 530 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 VPS41P49754 854 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 CDR1P51861 262 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 EIF3EP60228 445 aaKnown RBP14.64□□□□□ -0.07
LIMS2-206ENST00000409754 SMAD3P84022 425 aaKnown RBP14.64□□□□□ -0.07
LIMS2-206ENST00000409754 HIBCHQ6NVY1 386 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-206ENST00000409754 HFE2Q6ZVN8 426 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 BHLHA9Q7RTU4 235 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 SPATA2LQ8IUW3 424 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-206ENST00000409754 DCP1BQ8IZD4 617 aaKnown RBP14.64□□□□□ -0.07
LIMS2-206ENST00000409754 CCDC185Q8N715 623 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 PLD5Q8N7P1 536 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 GLIS1Q8NBF1 620 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 PCDH19Q8TAB3 1148 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 P3H4Q92791 437 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 COLEC11Q9BWP8 271 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 MRPL9Q9BYD2 267 aaKnown RBP14.64□□□□□ -0.07
LIMS2-206ENST00000409754 FOXP3Q9BZS1 431 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 ZCWPW1Q9H0M4 648 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 EPB41L4BQ9H329 900 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 DHX35Q9H5Z1 703 aaKnown RBP14.64□□□□□ -0.07
LIMS2-206ENST00000409754 MTMR10Q9NXD2 777 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 RCOR3Q9P2K3 495 aaPredicted RBP14.64□□□□□ -0.07
LIMS2-206ENST00000409754 FZD10Q9ULW2 581 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 USP3Q9Y6I4 520 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 PRUNE2Q8WUY3 3088 aa14.64□□□□□ -0.07
LIMS2-206ENST00000409754 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 M0QYT0 321 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 CAPN9O14815 690 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 CA3P07451 260 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 NUDT17P0C025 328 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 RBP3P10745 1247 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 ZFXP17010 805 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 DNAJB2P25686 324 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 AIF1P55008 147 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 EIF3BP55884 814 aaKnown RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 P3H1Q32P28 736 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 SYPL2Q5VXT5 272 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 CEP128Q6ZU80 1094 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 TRMT10CQ7L0Y3 403 aaKnown RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 PRUNE1Q86TP1 453 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 FAM131BQ86XD5 332 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 RSAD2Q8WXG1 361 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 PGAP3Q96FM1 320 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 KCTD15Q96SI1 283 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 TMEM175Q9BSA9 504 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 NKX2-4Q9H2Z4 354 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 TTYH1Q9H313 450 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 PRDM16Q9HAZ2 1276 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 AAASQ9NRG9 546 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 ADAM28Q9UKQ2 775 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 NAALADL1Q9UQQ1 740 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 COL6A3P12111 3177 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 ZSCAN5DPP0CG00 497 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 ETS1P14921 441 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 CYP2F1P24903 491 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 STIP1P31948 543 aaKnown RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 BCAR1P56945 870 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 PITX1P78337 314 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 DEUP1Q05D60 604 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 ZNF844Q08AG5 666 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 GPS1Q13098 491 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 NFE2Q16621 373 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 PPP6R3Q5H9R7 873 aaPredicted RBP14.63□□□□□ -0.07
LIMS2-206ENST00000409754 CEP85LQ5SZL2 805 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 BEND5Q7L4P6 421 aa14.63□□□□□ -0.07
LIMS2-206ENST00000409754 ARL8AQ96BM9 186 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms