RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TBX10O75333 385 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 SERPINA6P08185 405 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 CSH1P0DML2 217 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 CSH2P0DML3 217 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 GOLGA7BQ2TAP0 167 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 TRMT5Q32P41 509 aaKnown RBP11.11□□□□□ -0.63
CLIP4-204ENST00000404424 HSF5Q4G112 596 aaPredicted RBP11.11□□□□□ -0.63
CLIP4-204ENST00000404424 PKDCCQ504Y2 493 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 ZNF534Q76KX8 674 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 NET1Q7Z628 596 aaPredicted RBP11.11□□□□□ -0.63
CLIP4-204ENST00000404424 ACMSDQ8TDX5 336 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 WDR60Q8WVS4 1066 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 SCG3Q8WXD2 468 aaKnown RBP11.11□□□□□ -0.63
CLIP4-204ENST00000404424 VCXQ9H320 206 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 STN1Q9H668 368 aaKnown RBP11.11□□□□□ -0.63
CLIP4-204ENST00000404424 GPATCH2LQ9NWQ4 482 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 DPP3Q9NY33 737 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 ERAP1Q9NZ08 941 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 GGA3Q9NZ52 723 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 ARMCX1Q9P291 453 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 PPARGC1AQ9UBK2 798 aaKnown RBP11.11□□□□□ -0.63
CLIP4-204ENST00000404424 H3BRJ5 948 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 PIK3R2O00459 728 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 LINGO3P0C6S8 592 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 CYP2F1P24903 491 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 PTPN9P43378 593 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 SESN3P58005 492 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 IRX1P78414 480 aaPredicted RBP11.11□□□□□ -0.63
CLIP4-204ENST00000404424 GRIK3Q13003 919 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 STX3Q13277 289 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 SEMA5AQ13591 1074 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 VGLL4Q14135 290 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 DPYSL2Q16555 572 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 PMF1Q6P1K2 205 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 STKLD1Q8NE28 680 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 CCDC106Q9BWC9 280 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 PCMTD2Q9NV79 361 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 MOCS1Q9NZB8 636 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 DNAJB4Q9UDY4 337 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 GTF2IRD1Q9UHL9 959 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 ANGPTL2Q9UKU9 493 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 MAD1L1Q9Y6D9 718 aa11.11□□□□□ -0.63
CLIP4-204ENST00000404424 A0A087WZ62 844 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 A6NJR5 290 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 CIB2O75838 187 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 TM7SF2O76062 418 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 NPTXRO95502 500 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 METTL18O95568 372 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 ENO1P06733 434 aaKnown RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 MLNP12872 115 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 RGS7P49802 495 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 AQP5P55064 265 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 HDAC4P56524 1084 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 THOC5Q13769 683 aaKnown RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 BMPR2Q13873 1038 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 CA9Q16790 459 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 PPP1R26Q5T8A7 1209 aaPredicted RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 SCUBE1Q8IWY4 988 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 HACE1Q8IYU2 909 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 TMEM130Q8N3G9 435 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 TRPM4Q8TD43 1214 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 DEPDC1BQ8WUY9 529 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 SLC35F5Q8WV83 523 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 KHSRPQ92945 711 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 FGD4Q96M96 766 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 FAM161BQ96MY7 647 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 FDXACB1Q9BRP7 624 aaPredicted RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 HESX1Q9UBX0 185 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 HBS1LQ9Y450 684 aaKnown RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 HMX2A2RU54 273 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 DPPA5A6NC42 116 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 CYB561D2O14569 222 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 IRF6O14896 467 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 UGT1A9O60656 530 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 PDHA1P08559 390 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 TXNP10599 105 aaKnown RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 ARF4P18085 180 aaPredicted RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 L1CAMP32004 1257 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 FDFT1P37268 417 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 PRKG1Q13976 671 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 TTLL4Q14679 1199 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 PPP6R3Q5H9R7 873 aaPredicted RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 MROH9Q5TGP6 573 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 STEAP4Q687X5 459 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 TREML1Q86YW5 311 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 CCNJLQ8IV13 435 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 WDR75Q8IWA0 830 aaKnown RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 LINC01465Q8N7H1 131 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 C12orf29Q8N999 325 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 RBM15BQ8NDT2 890 aaKnown RBP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 NRG4Q8WWG1 115 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 CPB2Q96IY4 423 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 QKIQ96PU8 341 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLIP4-204ENST00000404424 FAM96AQ9H5X1 160 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 UGT1A7Q9HAW7 530 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 UGT1A10Q9HAW8 530 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 UGT1A8Q9HAW9 530 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 PRDM16Q9HAZ2 1276 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 MORF4L1Q9UBU8 362 aa11.1□□□□□ -0.63
CLIP4-204ENST00000404424 PLA2G4CQ9UP65 541 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms