RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 MAP3K7CLP57077 242 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 ACTN3Q08043 901 aaPredicted RBP12.21□□□□□ -0.45
COL25A1-202ENST00000399127 SLC5A9Q2M3M2 681 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 C3orf62Q6ZUJ4 267 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 PAQR9Q6ZVX9 377 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 PDIK1LQ8N165 341 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 CCDC110Q8TBZ0 833 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 TEKT4Q8WW24 435 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 FAF2Q96CS3 445 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 SENP8Q96LD8 212 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 C11orf84Q9BUA3 381 aaPredicted RBP12.21□□□□□ -0.45
COL25A1-202ENST00000399127 NRDE2Q9H7Z3 1164 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 TRPV2Q9Y5S1 764 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 C5orf60A6NFR6 353 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 GOT1P17174 413 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 STIP1P31948 543 aaKnown RBP12.21□□□□□ -0.45
COL25A1-202ENST00000399127 PTPN9P43378 593 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 SLC10A2Q12908 348 aaPredicted RBP12.21□□□□□ -0.45
COL25A1-202ENST00000399127 NAA25Q14CX7 972 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 MICALCLQ6ZW33 695 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 LIMS2Q7Z4I7 341 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 PALM2Q8IXS6 379 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 TOP6BLQ8N6T0 577 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 KCTD15Q96SI1 283 aaPredicted RBP12.21□□□□□ -0.45
COL25A1-202ENST00000399127 ELAC2Q9BQ52 826 aaKnown RBP12.21□□□□□ -0.45
COL25A1-202ENST00000399127 DUSP16Q9BY84 665 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 UPF3AQ9H1J1 476 aaKnown RBP12.21□□□□□ -0.45
COL25A1-202ENST00000399127 ETNK2Q9NVF9 386 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 MTMR10Q9NXD2 777 aa12.21□□□□□ -0.45
COL25A1-202ENST00000399127 DDX43Q9NXZ2 648 aaKnown RBP12.21□□□□□ -0.45
COL25A1-202ENST00000399127 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL25A1-202ENST00000399127 ARL5CA6NH57 179 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 ADAMTS4O75173 837 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 FSBPO95073 299 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 MYCP01106 439 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-202ENST00000399127 NPR3P17342 541 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 WARSP23381 471 aaKnown RBP12.2□□□□□ -0.46
COL25A1-202ENST00000399127 THPOP40225 353 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 ELK3P41970 407 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 SULT1E1P49888 294 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 SPRED3Q2MJR0 410 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 SLC9A4Q6AI14 798 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 C6orf89Q6UWU4 347 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 CLEC20AQ6ZU45 233 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 HFE2Q6ZVN8 426 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 ADAM32Q8TC27 787 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 FBF1Q8TES7 1133 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 KCNK16Q96T55 309 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 ZNF670Q9BS34 389 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 RHOBTB2Q9BYZ6 727 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 CRTAC1Q9NQ79 661 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 KRT82Q9NSB4 513 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 FGFR1OP2Q9NVK5 253 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 RABGEF1Q9UJ41 708 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 A0A1W2PPM1 405 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 MYBPHLA2RUH7 354 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 XPO1O14980 1071 aaKnown RBP12.2□□□□□ -0.46
COL25A1-202ENST00000399127 THP07101 528 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 FAM163BP0C2L3 166 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 GHRP10912 638 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 TGM2P21980 687 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 AMPD1P23109 780 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 LRPAP1P30533 357 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 CD52P31358 61 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 SLC8A3P57103 927 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 RNASELQ05823 741 aaKnown RBP12.2□□□□□ -0.46
COL25A1-202ENST00000399127 NME3Q13232 169 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 PDCD2Q16342 344 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-202ENST00000399127 SYPL2Q5VXT5 272 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 TRABD2AQ86V40 505 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 ATP11CQ8NB49 1132 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 HASPINQ8TF76 798 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 CENPIQ92674 756 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-202ENST00000399127 HSFY1Q96LI6 401 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 CSPG4P5Q96PW8 444 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 HNRNPABQ99729 332 aaKnown RBP12.2□□□□□ -0.46
COL25A1-202ENST00000399127 SENP6Q9GZR1 1112 aaPredicted RBP12.2□□□□□ -0.46
COL25A1-202ENST00000399127 TRABDQ9H4I3 376 aa12.2□□□□□ -0.46
COL25A1-202ENST00000399127 SCN10AQ9Y5Y9 1956 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 POMCP01189 267 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 APRTP07741 180 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 STX2P32856 288 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 MATKP42679 507 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 ACADSBP45954 432 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 CACNA2D1P54289 1103 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 KCNJ11Q14654 390 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 DPYSL2Q16555 572 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 NUGGCQ68CJ6 796 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 AGMOQ6ZNB7 445 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 RSPH3Q86UC2 560 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 CEP57Q86XR8 500 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 SPATS2Q86XZ4 545 aaKnown RBP12.19□□□□□ -0.46
COL25A1-202ENST00000399127 SIX6OS1Q8N1H7 587 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 DRAXINQ8NBI3 349 aaPredicted RBP12.19□□□□□ -0.46
COL25A1-202ENST00000399127 ZNF296Q8WUU4 475 aaPredicted RBP12.19□□□□□ -0.46
COL25A1-202ENST00000399127 LRRC4Q9HBW1 653 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 KLC4Q9NSK0 619 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 TMEM30AQ9NV96 361 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 NKIRAS1Q9NYS0 192 aa12.19□□□□□ -0.46
COL25A1-202ENST00000399127 NDC80O14777 642 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms