RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NTAN1Q96AB6 310 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SENP8Q96LD8 212 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TRIM62Q9BVG3 475 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 BRD8Q9H0E9 1235 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 RAB6CQ9H0N0 254 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 VPS11Q9H270 941 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 POPDC2Q9HBU9 364 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 GPATCH2LQ9NWQ4 482 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PRKAG3Q9UGI9 489 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ST3GAL5Q9UNP4 418 aa18.36■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DGKIO75912 1065 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 F9P00740 461 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SKIP12755 728 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MAGEA3P43357 314 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SCTRP47872 440 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ADCY1Q08828 1119 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CCDC15Q0P6D6 951 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SEMA5AQ13591 1074 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PDK1Q15118 436 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SEPT7Q16181 437 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 HP1BP3Q5SSJ5 553 aaPredicted RBP18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SLC26A11Q86WA9 606 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 OSTM1Q86WC4 334 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SCML4Q8N228 414 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TFB1MQ8WVM0 346 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 WNT8BQ93098 351 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 LENG1Q96BZ8 264 aaPredicted RBP18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PGAP3Q96FM1 320 aaPredicted RBP18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 OLFM3Q96PB7 478 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SENP6Q9GZR1 1112 aaPredicted RBP18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 EIF2B3Q9NR50 452 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 USP3Q9Y6I4 520 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TCRBV9S1A1TA0A576 114 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 NCAM2O15394 837 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 INHBAP08476 426 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CYBAP13498 195 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 KRT4P19013 534 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SULT1E1P49888 294 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PPARDQ03181 441 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ADIGQ0VDE8 80 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 WSCD1Q658N2 575 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 KCNT2Q6UVM3 1135 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SAPCD2Q86UD0 394 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 GDAP1Q8TB36 358 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MZB1Q8WU39 189 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 FAM149B1Q96BN6 582 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MTBPQ96DY7 904 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 KCTD15Q96SI1 283 aaPredicted RBP18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 NAT9Q9BTE0 207 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ETNK1Q9HBU6 452 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DDX43Q9NXZ2 648 aaKnown RBP18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CHMP2BQ9UQN3 213 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SQORQ9Y6N5 450 aa18.35■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TRIP12Q14669 1992 aaPredicted RBP18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CFAP73A6NFT4 308 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 OPHN1O60890 802 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 KRT37O76014 449 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 MT-ND3P03897 115 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PRKCHP24723 683 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 TKTP29401 623 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 GLUD2P49448 558 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 FCGRTP55899 365 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 GAD2Q05329 585 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SCAPQ12770 1279 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 NBPF20Q3BBV1 942 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DCAF6Q58WW2 860 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 INTS6LQ5JSJ4 861 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ZNF618Q5T7W0 954 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CLEC20AQ6ZU45 233 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 PAQR9Q6ZVX9 377 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 LRRC6Q86X45 466 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ZNF398Q8TD17 642 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 LRRC8CQ8TDW0 803 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 CLEC4CQ8WTT0 213 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 IRGQQ8WZA9 623 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 WDR83Q9BRX9 315 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 GOLGA2P5Q9HBQ8 144 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 ZC3H7BQ9UGR2 993 aaKnown RBP18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DSEQ9UL01 958 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SLC12A4Q9UP95 1085 aa18.34■□□□□ 0.53
HLA-DQB1-204ENST00000399084 SCN10AQ9Y5Y9 1956 aa18.33■□□□□ 0.53
HLA-DQB1-204ENST00000399084 DNM1LO00429 736 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 APRTP07741 180 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 ALDH3A1P30838 453 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 YWHAGP61981 247 aaKnown RBP eCLIP18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SLC18A2Q05940 514 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PAFAH1B3Q15102 231 aaKnown RBP18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 RAB41Q5JT25 222 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SPDYAQ5MJ70 313 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 TTC39BQ5VTQ0 682 aaPredicted RBP18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 NCBP2-AS2Q69YL0 99 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 PAXIP1Q6ZW49 1069 aaPredicted RBP18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 BEND5Q7L4P6 421 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 BANPQ8N9N5 519 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 GSTCDQ8NEC7 633 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 HTR3CQ8WXA8 447 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 SYT15Q9BQS2 421 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 MED10Q9BTT4 135 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 RXFP1Q9HBX9 757 aa18.33■□□□□ 0.52
HLA-DQB1-204ENST00000399084 DTLQ9NZJ0 730 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms