RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SMOQ99835 787 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 UBXN6Q9BZV1 441 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 GDE1Q9NZC3 331 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 LCMT1Q9UIC8 334 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 CDY1Q9Y6F8 540 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 SIGLEC16A6NMB1 481 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 FTCDO95954 541 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 CYP2F1P24903 491 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 RPL34P49207 117 aaKnown RBP13.86□□□□□ -0.19
SEC13-209ENST00000397117 GPR17Q13304 367 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 SLC5A9Q2M3M2 681 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 CFAP221Q4G0U5 840 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 C11orf63Q6NUN7 778 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 VSTM1Q6UX27 236 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 PEX26Q7Z412 305 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 ZNF687Q8N1G0 1237 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 LRRC57Q8N9N7 239 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 C2orf15Q8WU43 125 aaKnown RBP13.86□□□□□ -0.19
SEC13-209ENST00000397117 MCRS1Q96EZ8 462 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 BTBD6Q96KE9 485 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 CNTNAP3BQ96NU0 1288 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 PGLYRP2Q96PD5 576 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 KCNK16Q96T55 309 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 CNTNAP3Q9BZ76 1288 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 CSNK1G1Q9HCP0 422 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 ABCB6Q9NP58 842 aa13.86□□□□□ -0.19
SEC13-209ENST00000397117 PRMT8Q9NR22 394 aaPredicted RBP13.86□□□□□ -0.19
SEC13-209ENST00000397117 SMG5Q9UPR3 1016 aaKnown RBP13.86□□□□□ -0.19
SEC13-209ENST00000397117 MRPS23Q9Y3D9 190 aaKnown RBP13.86□□□□□ -0.19
SEC13-209ENST00000397117 ENC1O14682 589 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 NCAM2O15394 837 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 FBXO21O94952 628 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 GJB6O95452 261 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 RHOP08100 348 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 TKTL1P51854 596 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 CACNA2D1P54289 1103 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 SLC6A3Q01959 620 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 ADIGQ0VDE8 80 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 TANGO2Q6ICL3 276 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 SLC8B1Q6J4K2 584 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 TSSK4Q6SA08 328 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 ZNF852Q6ZMS4 543 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 SCN4BQ8IWT1 228 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 SPPL2BQ8TCT7 592 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 METTL5Q9NRN9 209 aaKnown RBP13.85□□□□□ -0.19
SEC13-209ENST00000397117 IP6K2Q9UHH9 426 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 AMFRQ9UKV5 643 aa13.85□□□□□ -0.19
SEC13-209ENST00000397117 TCRBV5S1A1TA0A578 114 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 TMEM191CA6NGB0 347 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 PRR5-ARHGAP8B1AHC4 643 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 F8VP50 259 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 TRIM66O15016 1216 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 PAPSS1O43252 624 aaPredicted RBP13.84□□□□□ -0.19
SEC13-209ENST00000397117 TDGF1P13385 188 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 PTPN2P17706 415 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 MAGEA11P43364 429 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 RNASE9P60153 205 aaKnown RBP13.84□□□□□ -0.19
SEC13-209ENST00000397117 RPL7AP62424 266 aaKnown RBP13.84□□□□□ -0.19
SEC13-209ENST00000397117 ARHGAP8P85298 464 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 PPP1R15BQ5SWA1 713 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 OLFML1Q6UWY5 402 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 RNF19BQ6ZMZ0 732 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 MAMSTRQ6ZN01 415 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 SLFN11Q7Z7L1 901 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 ATAD1Q8NBU5 361 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 ZMIZ2Q8NF64 920 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 ELSPBP1Q96BH3 223 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 FAM126AQ9BYI3 521 aaPredicted RBP13.84□□□□□ -0.19
SEC13-209ENST00000397117 TRIM7Q9C029 511 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 GOLPH3Q9H4A6 298 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 PNPLA8Q9NP80 782 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 HEBP1Q9NRV9 189 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 TMEM30AQ9NV96 361 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 MRPS17Q9Y2R5 130 aaKnown RBP13.84□□□□□ -0.19
SEC13-209ENST00000397117 ALG6Q9Y672 507 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 COL4A2P08572 1712 aa13.84□□□□□ -0.19
SEC13-209ENST00000397117 MTMR11A4FU01 709 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 FANCGO15287 622 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 SART1O43290 800 aaKnown RBP13.83□□□□□ -0.2
SEC13-209ENST00000397117 SPOPO43791 374 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 GABBR2O75899 941 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 URI1O94763 535 aaPredicted RBP13.83□□□□□ -0.2
SEC13-209ENST00000397117 PROSCO94903 275 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 ABLIM3O94929 683 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 ATP1A1P05023 1023 aaKnown RBP13.83□□□□□ -0.2
SEC13-209ENST00000397117 DESP17661 470 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 CEBPBP17676 345 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 FCARP24071 287 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 RFC1P35251 1148 aaPredicted RBP13.83□□□□□ -0.2
SEC13-209ENST00000397117 ROR1Q01973 937 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 ADCY1Q08828 1119 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 MTAPQ13126 283 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 RPS6KA1Q15418 735 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 EFHC1Q5JVL4 640 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 PRSS36Q5K4E3 855 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 MEI1Q5TIA1 1274 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 ZNF461Q8TAF7 563 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 DNASE1L2Q92874 299 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 RALGAPA1Q6GYQ0 2036 aa13.83□□□□□ -0.2
SEC13-209ENST00000397117 WDR27A2RRH5 827 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms