RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SCARA5Q6ZMJ2 495 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 ZNF605Q86T29 641 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.41
SOD1-202ENST00000389995 WDR49Q8IV35 697 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 ZMIZ2Q8NF64 920 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 ZNF516Q92618 1163 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 JAKMIP2Q96AA8 810 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 CCDC127Q96BQ5 260 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 SIPA1Q96FS4 1042 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 CLIC6Q96NY7 704 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 C6orf106Q9H6K1 298 aaPredicted RBP12.46□□□□□ -0.41
SOD1-202ENST00000389995 KRT82Q9NSB4 513 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 PANK4Q9NVE7 773 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 IL37Q9NZH6 218 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 HSPBP1Q9NZL4 362 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 PCDHGB2Q9Y5G2 931 aa12.46□□□□□ -0.41
SOD1-202ENST00000389995 H0Y8X5 98 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 PYCARD-AS1I3L0S3 204 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 HLA-EP13747 358 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 CCDC130P13994 396 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 ACSL1P33121 698 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 HOXD13P35453 343 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 C8orf34Q49A92 452 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 PRAMEF14Q5SWL7 426 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 RRAGBQ5VZM2 374 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 SV2BQ7L1I2 683 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 GPRIN1Q7Z2K8 1008 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 ACOT1Q86TX2 421 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 FUKQ8N0W3 1084 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 PRCCQ92733 491 aaPredicted RBP12.45□□□□□ -0.42
SOD1-202ENST00000389995 FCRL3Q96P31 734 aaPredicted RBP12.45□□□□□ -0.42
SOD1-202ENST00000389995 SMOQ99835 787 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 DUSP9Q99956 384 aaKnown RBP12.45□□□□□ -0.42
SOD1-202ENST00000389995 NUP58Q9BVL2 599 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 DMAP1Q9NPF5 467 aaPredicted RBP12.45□□□□□ -0.42
SOD1-202ENST00000389995 OLFML3Q9NRN5 406 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 THAP10Q9P2Z0 257 aaPredicted RBP12.45□□□□□ -0.42
SOD1-202ENST00000389995 CLEC4EQ9ULY5 219 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 ANKRD6Q9Y2G4 727 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 NFE2L3Q9Y4A8 694 aa12.45□□□□□ -0.42
SOD1-202ENST00000389995 COL5A1P20908 1838 aaPredicted RBP12.45□□□□□ -0.42
SOD1-202ENST00000389995 FAM92AA1XBS5 289 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 CYP26A1O43174 497 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 SYNCRIPO60506 623 aaKnown RBP12.44□□□□□ -0.42
SOD1-202ENST00000389995 CLSTN1O94985 981 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 ACADMP11310 421 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 ACO1P21399 889 aaKnown RBP12.44□□□□□ -0.42
SOD1-202ENST00000389995 OXTRP30559 389 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 ATP5C1P36542 298 aaKnown RBP12.44□□□□□ -0.42
SOD1-202ENST00000389995 AFF3P51826 1226 aaKnown RBP12.44□□□□□ -0.42
SOD1-202ENST00000389995 MFAP3P55082 362 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 MAP3K7CLP57077 242 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 ZNF234Q14588 700 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 SUZ12Q15022 739 aaKnown RBP12.44□□□□□ -0.42
SOD1-202ENST00000389995 SURF1Q15526 300 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 GATAD2AQ86YP4 633 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 ZNF366Q8N895 744 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
SOD1-202ENST00000389995 SDCBP2Q9H190 292 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 NMUR1Q9HB89 426 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 TM9SF3Q9HD45 589 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 STK17AQ9UEE5 414 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 LSM7Q9UK45 103 aaKnown RBP12.44□□□□□ -0.42
SOD1-202ENST00000389995 FBXO10Q9UK96 956 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 CLIC4Q9Y696 253 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 SPTA1P02549 2419 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 BOD1L1Q8NFC6 3051 aa12.44□□□□□ -0.42
SOD1-202ENST00000389995 NYNRINQ9P2P1 1898 aaKnown RBP12.44□□□□□ -0.42
SOD1-202ENST00000389995 ATP8B3O60423 1300 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 A0A087X0B3 334 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 FRMD3A2A2Y4 597 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 TK2O00142 265 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 CLIC2O15247 247 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 KLKB1P03952 638 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 EPHX1P07099 455 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 HMBSP08397 361 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 JUPP14923 745 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 GRK6P43250 576 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 CASP4P49662 377 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 CYP2J2P51589 502 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 DNAJC3Q13217 504 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 TRPC3Q13507 836 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 ENPP2Q13822 863 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 SNRNP35Q16560 246 aaKnown RBP12.43□□□□□ -0.42
SOD1-202ENST00000389995 TMEM215Q68D42 235 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 PCSK4Q6UW60 755 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 Q6ZNB5 142 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 SLC2A14Q8TDB8 520 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 SMARCD1Q96GM5 515 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 CGRRF1Q99675 332 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 XYLT2Q9H1B5 865 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.42
SOD1-202ENST00000389995 TLR8Q9NR97 1041 aaKnown RBP12.43□□□□□ -0.42
SOD1-202ENST00000389995 FAM49BQ9NUQ9 324 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 FTSJ1Q9UET6 329 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 CCDC39Q9UFE4 941 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 HMGXB4Q9UGU5 601 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.43□□□□□ -0.42
SOD1-202ENST00000389995 KIF3AQ9Y496 699 aa12.43□□□□□ -0.42
SOD1-202ENST00000389995 AK5Q9Y6K8 562 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms