RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 COG8Q96MW5 612 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 C11orf70Q9BRQ4 267 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 HERC2P3Q9BVR0 1158 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 VPS45Q9NRW7 570 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 STK39Q9UEW8 545 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 XPO7Q9UIA9 1087 aaKnown RBP21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 C1orf232A0A0U1RR37 186 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 CXorf49A8MYA2 514 aaPredicted RBP21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 PSTPIP1O43586 416 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 KRT1P04264 644 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 S100BP04271 92 aaPredicted RBP21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 GAP43P17677 238 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 IREB2P48200 963 aaKnown RBP21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 C16orf46Q6P387 395 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 ATG14Q6ZNE5 492 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 PDIK1LQ8N165 341 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 NAT8LQ8N9F0 302 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 CBWD1Q9BRT8 395 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 THAP1Q9NVV9 213 aa21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 SCHIP1Q9P0W5 487 aaPredicted RBP21.68■■□□□ 1.06
NKX3-2-201ENST00000382438 BPGMP07738 259 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 L1CAMP32004 1257 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 IDH3AP50213 366 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 NUDT2P50583 147 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 MFAP3P55082 362 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 MGAT5BQ3V5L5 792 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 SLFN12Q8IYM2 578 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 CADM3Q8N126 398 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 PCYOX1LQ8NBM8 494 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 CFAP36Q96G28 342 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 PCDH9Q9HC56 1237 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 PNMA6FA0A0J9YX94 578 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 hCG_1984214I3L0E3 225 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 ZNF182P17025 639 aaPredicted RBP21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 HSPA1LP34931 641 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 NME3Q13232 169 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 ZBED5Q49AG3 693 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 TBC1D10BQ4KMP7 808 aaPredicted RBP21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 POTEAQ6S8J7 498 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 TMEM26Q6ZUK4 368 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 FIBCD1Q8N539 461 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 NEDD1Q8NHV4 660 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 USP33Q8TEY7 942 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 FAM84AQ96KN4 292 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 CENPOQ9BU64 300 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 CDH19Q9H159 772 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 CXorf21Q9HAI6 301 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 ERGIC3Q9Y282 383 aa21.67■■□□□ 1.06
NKX3-2-201ENST00000382438 ANKRD34BA5PLL1 514 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 USP17L10C9JJH3 530 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 GRM5P41594 1212 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 RPL10AP62906 217 aaKnown RBP21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 BASP1P80723 227 aaKnown RBP21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 ZBTB17Q13105 803 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 TXNRD3NBQ6F5E7 133 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 NDUFAF2Q8N183 169 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 SIX5Q8N196 739 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 FAM156AQ8NDB6 213 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 KLHL32Q96NJ5 620 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 SLITRK1Q96PX8 696 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 EIF2AK1Q9BQI3 630 aaKnown RBP21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 RAB20Q9NX57 234 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 TRPM3Q9HCF6 1732 aaPredicted RBP21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 ZBTB14O43829 449 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 KCNA4P22459 653 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 TRAF2Q12933 501 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 PTP4A2Q12974 167 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 NFIL3Q16649 462 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 TTC39BQ5VTQ0 682 aaPredicted RBP21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 CYP2W1Q8TAV3 490 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 PIGBQ92521 554 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 DAPK2Q9UIK4 370 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 GNPTGQ9UJJ9 305 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 NUB1Q9Y5A7 615 aa21.66■■□□□ 1.06
NKX3-2-201ENST00000382438 CHMP2AO43633 222 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 TATDN1Q6P1N9 297 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 TMEM102Q8N9M5 508 aaPredicted RBP21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 FAM47BQ8NA70 645 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 SGF29Q96ES7 293 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 CLK4Q9HAZ1 481 aaKnown RBP21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 HOMER2Q9NSB8 354 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 STX16-NPEPL1H3BU86 382 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 SEC24DO94855 1032 aaPredicted RBP21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 ESRRBO95718 433 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 CFHP08603 1231 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 UNGP13051 313 aaPredicted RBP21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 JAK1P23458 1154 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 TIGD2Q4W5G0 525 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 PERM1Q5SV97 790 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 ANKRD26P1Q6NSI1 321 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 SLC4A9Q96Q91 983 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 SLC29A1Q99808 456 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 CDH7Q9ULB5 785 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 ATF5Q9Y2D1 282 aaPredicted RBP21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 ZNFX1Q9P2E3 1918 aaKnown RBP21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 RFPL1O75677 317 aa21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 RPL22P35268 128 aaKnown RBP21.65■■□□□ 1.06
NKX3-2-201ENST00000382438 TCF7P36402 384 aaPredicted RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms