RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 CPQQ9Y646 472 aa19.61■□□□□ 0.73
SMN2-202ENST00000380742 ZFP37Q9Y6Q3 630 aaPredicted RBP19.61■□□□□ 0.73
SMN2-202ENST00000380742 TCF20Q9UGU0 1960 aaKnown RBP19.61■□□□□ 0.73
SMN2-202ENST00000380742 KIF26AQ9ULI4 1882 aaPredicted RBP19.6■□□□□ 0.73
SMN2-202ENST00000380742 MSI1O43347 362 aaKnown RBP19.6■□□□□ 0.73
SMN2-202ENST00000380742 TRUB2O95900 331 aaKnown RBP19.6■□□□□ 0.73
SMN2-202ENST00000380742 SDC4P31431 198 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 SULT1E1P49888 294 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 ZNF143P52747 638 aaPredicted RBP19.6■□□□□ 0.73
SMN2-202ENST00000380742 ZNF252P-AS1Q0IIN9 211 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 EIF4EBP2Q13542 120 aaPredicted RBP19.6■□□□□ 0.73
SMN2-202ENST00000380742 TCEAL1Q15170 157 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 C15orf59Q2T9L4 293 aaPredicted RBP19.6■□□□□ 0.73
SMN2-202ENST00000380742 SLC25A52Q3SY17 297 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 RAB6CQ53S08 254 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 ST13P5Q8NFI4 369 aaPredicted RBP19.6■□□□□ 0.73
SMN2-202ENST00000380742 RFFLQ8WZ73 363 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 SMARCD2Q92925 531 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 USP13Q92995 863 aaPredicted RBP19.6■□□□□ 0.73
SMN2-202ENST00000380742 BTBD6Q96KE9 485 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 TBCBQ99426 244 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 RAB6CQ9H0N0 254 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 TDP1Q9NUW8 608 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 RRN3Q9NYV6 651 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 STAP1Q9ULZ2 295 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 ARHGAP26Q9UNA1 814 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 FAM50BQ9Y247 325 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 DUSP10Q9Y6W6 482 aa19.6■□□□□ 0.73
SMN2-202ENST00000380742 SLC12A8A0AV02 714 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 C2CD4DB7Z1M9 353 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 M0QYT0 321 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 DPYSL4O14531 572 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 FCARP24071 287 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 PTPN9P43378 593 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 ATP11AP98196 1134 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 SH3PXD2AQ5TCZ1 1133 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 BNIPLQ7Z465 357 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 RHOT2Q8IXI1 618 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 ADAMTS19Q8TE59 1207 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 WBP2Q969T9 261 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 ACSF2Q96CM8 615 aaPredicted RBP19.59■□□□□ 0.73
SMN2-202ENST00000380742 RSPRY1Q96DX4 576 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 FAM204AQ9H8W3 233 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 EPS15L1Q9UBC2 864 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 SALL4Q9UJQ4 1053 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 ANAPC7Q9UJX3 599 aa19.59■□□□□ 0.73
SMN2-202ENST00000380742 SYNJ2BP-COX16A0A087WUM0 186 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 IRAK2O43187 625 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 CCP110O43303 1012 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 MTA2O94776 668 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 HMBSP08397 361 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 CCDC175P0C221 793 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 VIPR2P41587 438 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 CDO1Q16878 200 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 AAK1Q2M2I8 961 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 TDRD5Q8NAT2 981 aaKnown RBP19.58■□□□□ 0.73
SMN2-202ENST00000380742 RIN3Q8TB24 985 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 FNIP1Q8TF40 1166 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 CENPIQ92674 756 aaPredicted RBP19.58■□□□□ 0.73
SMN2-202ENST00000380742 PGAP3Q96FM1 320 aaPredicted RBP19.58■□□□□ 0.73
SMN2-202ENST00000380742 RPGRIP1Q96KN7 1286 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 SERPINB11Q96P15 392 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 CNPY3Q9BT09 278 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 TRPV4Q9HBA0 871 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 DDIT4Q9NX09 232 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 COX16Q9P0S2 106 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 TRIM10Q9UDY6 481 aa19.58■□□□□ 0.73
SMN2-202ENST00000380742 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.58■□□□□ 0.73
SMN2-202ENST00000380742 MYO10Q9HD67 2058 aa19.58■□□□□ 0.72
SMN2-202ENST00000380742 A0A0A6YYK5 440 aaPredicted RBP19.57■□□□□ 0.72
SMN2-202ENST00000380742 BTNL10A8MVZ5 291 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 LEFTY2O00292 366 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 ENDOD1O94919 500 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 IRF1P10914 325 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 PSMA2P25787 234 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 ATXN1P54253 815 aaKnown RBP19.57■□□□□ 0.72
SMN2-202ENST00000380742 COG7P83436 770 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 NME3Q13232 169 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 TRIP4Q15650 581 aaPredicted RBP19.57■□□□□ 0.72
SMN2-202ENST00000380742 TANGO2Q6ICL3 276 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 PARM1Q6UWI2 310 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 SH3RF2Q8TEC5 729 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 FAM172AQ8WUF8 416 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 FGF14Q92915 247 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 SLC39A13Q96H72 371 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 LRRC3BQ96PB8 259 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 PIGVQ9NUD9 493 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 PYCARDQ9ULZ3 195 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 TLR6Q9Y2C9 796 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 PPP2R2CQ9Y2T4 447 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 HBS1LQ9Y450 684 aaKnown RBP19.57■□□□□ 0.72
SMN2-202ENST00000380742 NR2E1Q9Y466 385 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 STC2O76061 302 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 IGLV3-27P01718 113 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 GBP1P32455 592 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 HADHBP55084 474 aaKnown RBP19.57■□□□□ 0.72
SMN2-202ENST00000380742 TBX4P57082 545 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 DEUP1Q05D60 604 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 KIF5AQ12840 1032 aa19.57■□□□□ 0.72
SMN2-202ENST00000380742 NNTQ13423 1086 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms