RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	SGK1	O00141	431 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	XPO1	O14980	1071 aa	Known RBP	12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	MAP3K6	O95382	1288 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	DMPK	Q09013	629 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	TFDP3	Q5H9I0	405 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	FAM131B	Q86XD5	332 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	GALNT15	Q8N3T1	639 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	SLC43A3	Q8NBI5	491 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	MYCBPAP	Q8TBZ2	947 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	EDEM1	Q92611	657 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	ARL8A	Q96BM9	186 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	SLC4A5	Q9BY07	1137 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	TTC7A	Q9ULT0	858 aa	Predicted RBP	12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	HEY1	Q9Y5J3	304 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	ZBBX	A8MT70	800 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	HSF2BP	O75031	334 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	E2F6	O75461	281 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	NCAM1	P13591	858 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	IL1R2	P27930	398 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	CDK7	P50613	346 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	KRT17	Q04695	432 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	CTXN3	Q4LDR2	81 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	KIAA0319	Q5VV43	1072 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	CLEC20A	Q6ZU45	233 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	ZNF598	Q86UK7	904 aa	Known RBP	12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	SMARCD1	Q96GM5	515 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	HSFY1	Q96LI6	401 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	SLITRK1	Q96PX8	696 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	CCT8L2	Q96SF2	557 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	TMEM59L	Q9UK28	342 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	OGDHL	Q9ULD0	1010 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	CD48	P09326	243 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	RAG1	P15918	1043 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	ATXN1	P54253	815 aa	Known RBP	12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	DHX34	Q14147	1143 aa	Known RBP	12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	IKBKE	Q14164	716 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	P3H1	Q32P28	736 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	RNF220	Q5VTB9	566 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	C1orf228	Q6PIY5	440 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	SLC7A14	Q8TBB6	771 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	ERP44	Q9BS26	406 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	COLEC11	Q9BWP8	271 aa		12.13	□□□□□ -0.47
LMO7-204	ENST00000377499	C2CD4B	A6NLJ0	364 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499		M0QYT0	321 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	SHOX2	O60902	331 aa	Predicted RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	FAM153B	P0C7A2	387 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	GABRB2	P47870	512 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	ALDH7A1	P49419	539 aa	Known RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	SESN3	P58005	492 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	YWHAZ	P63104	245 aa	Known RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	FAM153C	Q494X1	144 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	CCDC14	Q49A88	953 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	CFAP58	Q5T655	872 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	TTC27	Q6P3X3	843 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	CCDC80	Q76M96	950 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	GRK7	Q8WTQ7	553 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	FAM114A2	Q9NRY5	505 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	DNAJC17	Q9NVM6	304 aa	Known RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	NOP53	Q9NZM5	478 aa	Known RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	FAM153A	Q9UHL3	310 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	NRP1	O14786	923 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	FSCN2	O14926	492 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	HGS	O14964	777 aa	Predicted RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	MMRN1	Q13201	1228 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	PLEKHG4	Q58EX7	1191 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	SDHAF4	Q5VUM1	108 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	ZC3H18	Q86VM9	953 aa	Known RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	ZDHHC17	Q8IUH5	632 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	RSAD2	Q8WXG1	361 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	HERPUD2	Q9BSE4	406 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	C10orf88	Q9H8K7	445 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	MTRF1L	Q9UGC7	380 aa	Known RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	PAIP2B	Q9ULR5	123 aa	Known RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	STAP1	Q9ULZ2	295 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	STK38L	Q9Y2H1	464 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	ATP8A1	Q9Y2Q0	1164 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	THSD7B	Q9C0I4	1608 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	TCRBV5S1A1T	A0A578	114 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499		H7C0C1	242 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	PITPNM1	O00562	1244 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	GABRD	O14764	452 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	TRUB2	O95900	331 aa	Known RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	KDELR1	P24390	212 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	LSP1	P33241	339 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	ATP5O	P48047	213 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	CUL1	Q13616	776 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	INTS6L	Q5JSJ4	861 aa	Known RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	TRAF7	Q6Q0C0	670 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	TMCO2	Q7Z6W1	182 aa	Predicted RBP	12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	PRUNE1	Q86TP1	453 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	ZDHHC14	Q8IZN3	488 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	CCDC33	Q8N5R6	958 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	ATP11C	Q8NB49	1132 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	STKLD1	Q8NE28	680 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	TTC16	Q8NEE8	873 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	SLX1A	Q9BQ83	275 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	ABCF3	Q9NUQ8	709 aa		12.12	□□□□□ -0.47
LMO7-204	ENST00000377499	FAM187A	A6NFU0	413 aa		12.11	□□□□□ -0.47
LMO7-204	ENST00000377499	B4GALT3	O60512	393 aa		12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms