RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 IRAK2O43187 625 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 ATXN1P54253 815 aaKnown RBP22.21■■□□□ 1.15
CBWD3-202ENST00000377342 HDAC4P56524 1084 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 GPR158Q5T848 1215 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 CES5AQ6NT32 575 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 C11orf63Q6NUN7 778 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 RNF10Q8N5U6 811 aaKnown RBP22.21■■□□□ 1.15
CBWD3-202ENST00000377342 MAB21L3Q8N8X9 362 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 FAM172AQ8WUF8 416 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 PGAP3Q96FM1 320 aaPredicted RBP22.21■■□□□ 1.15
CBWD3-202ENST00000377342 ZFRQ96KR1 1074 aaKnown RBP22.21■■□□□ 1.15
CBWD3-202ENST00000377342 CDK5RAP1Q96SZ6 601 aaKnown RBP22.21■■□□□ 1.15
CBWD3-202ENST00000377342 SLC46A2Q9BY10 475 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 FAM204AQ9H8W3 233 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 RRN3Q9NYV6 651 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 RASAL2Q9UJF2 1139 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 M0QYT0 321 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 LRCH4O75427 683 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 ENDOD1O94919 500 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 TCF4P15884 667 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 KCNA5P22460 613 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 FSHRP23945 695 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 MAN1A1P33908 653 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 PIGHQ14442 188 aaPredicted RBP22.2■■□□□ 1.15
CBWD3-202ENST00000377342 NPAS3Q8IXF0 933 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 ARL14EPQ8N8R7 260 aaPredicted RBP22.2■■□□□ 1.15
CBWD3-202ENST00000377342 SUSD6Q92537 303 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 CYP2S1Q96SQ9 504 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 PIGVQ9NUD9 493 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 DDIT4Q9NX09 232 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 MARCH2Q9P0N8 246 aa22.2■■□□□ 1.15
CBWD3-202ENST00000377342 GOLGA6L9A6NEM1 432 aa22.2■■□□□ 1.14
CBWD3-202ENST00000377342 DDX6P26196 483 aaKnown RBP eCLIP22.2■■□□□ 1.14
CBWD3-202ENST00000377342 ATP5C1P36542 298 aaKnown RBP22.2■■□□□ 1.14
CBWD3-202ENST00000377342 NAP1L1P55209 391 aaKnown RBP22.2■■□□□ 1.14
CBWD3-202ENST00000377342 SKIV2LQ15477 1246 aaKnown RBP22.2■■□□□ 1.14
CBWD3-202ENST00000377342 ATAT1Q5SQI0 421 aa22.2■■□□□ 1.14
CBWD3-202ENST00000377342 GET4Q7L5D6 327 aaPredicted RBP22.2■■□□□ 1.14
CBWD3-202ENST00000377342 STRADAQ7RTN6 431 aa22.2■■□□□ 1.14
CBWD3-202ENST00000377342 MIB1Q86YT6 1006 aa22.2■■□□□ 1.14
CBWD3-202ENST00000377342 ZSWIM3Q96MP5 696 aa22.2■■□□□ 1.14
CBWD3-202ENST00000377342 POMKQ9H5K3 350 aa22.2■■□□□ 1.14
CBWD3-202ENST00000377342 TASP1Q9H6P5 420 aa22.2■■□□□ 1.14
CBWD3-202ENST00000377342 DNMT3LQ9UJW3 386 aa22.2■■□□□ 1.14
CBWD3-202ENST00000377342 USP15Q9Y4E8 981 aaPredicted RBP22.2■■□□□ 1.14
CBWD3-202ENST00000377342 HYOU1Q9Y4L1 999 aa22.2■■□□□ 1.14
CBWD3-202ENST00000377342 GRXCR2A6NFK2 248 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 PALMO75781 387 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 PFKLP17858 780 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 NME3Q13232 169 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 ARHGAP15Q53QZ3 475 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 SLFN11Q7Z7L1 901 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 TADA2BQ86TJ2 420 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 CALR3Q96L12 384 aaKnown RBP22.19■■□□□ 1.14
CBWD3-202ENST00000377342 RIPOR3Q96MK2 946 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 SERPINB11Q96P15 392 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 LCMT1Q9UIC8 334 aa22.19■■□□□ 1.14
CBWD3-202ENST00000377342 KIF26AQ9ULI4 1882 aaPredicted RBP22.18■■□□□ 1.14
CBWD3-202ENST00000377342 SYNJ2BP-COX16A0A087WUM0 186 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 TRAV19A0A0A6YYK7 116 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 HDCP19113 662 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 RDXP35241 583 aaKnown RBP22.18■■□□□ 1.14
CBWD3-202ENST00000377342 MTHFRP42898 656 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 ZXDBP98169 803 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 CBX2Q14781 532 aaPredicted RBP22.18■■□□□ 1.14
CBWD3-202ENST00000377342 IFI16Q16666 785 aaKnown RBP22.18■■□□□ 1.14
CBWD3-202ENST00000377342 CYP4V2Q6ZWL3 525 aaPredicted RBP22.18■■□□□ 1.14
CBWD3-202ENST00000377342 DAAM2Q86T65 1068 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 ZSCAN30Q86W11 494 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 FGF13Q92913 245 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 PEBP4Q96S96 227 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 COX16Q9P0S2 106 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 COL6A3P12111 3177 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 UNC80Q8N2C7 3258 aa22.18■■□□□ 1.14
CBWD3-202ENST00000377342 SOBPA7XYQ1 873 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 IGLV3-27P01718 113 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 CKMP06732 381 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 MBL2P11226 248 aaPredicted RBP22.17■■□□□ 1.14
CBWD3-202ENST00000377342 SLC7A9P82251 487 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 DEUP1Q05D60 604 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 NNTQ13423 1086 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 ACAP1Q15027 740 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 CMTM8Q8IZV2 173 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.17■■□□□ 1.14
CBWD3-202ENST00000377342 ADAMTS19Q8TE59 1207 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 SLC39A13Q96H72 371 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 KLF16Q9BXK1 252 aaPredicted RBP22.17■■□□□ 1.14
CBWD3-202ENST00000377342 NACA2Q9H009 215 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 SMG9Q9H0W8 520 aaKnown RBP22.17■■□□□ 1.14
CBWD3-202ENST00000377342 USTQ9Y2C2 406 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 I6L893 689 aaPredicted RBP22.17■■□□□ 1.14
CBWD3-202ENST00000377342 PRAMEF12O95522 483 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 COMTP21964 271 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 TAS2R40P59535 323 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 SLC25A11Q02978 314 aaKnown RBP22.17■■□□□ 1.14
CBWD3-202ENST00000377342 TRIP4Q15650 581 aaPredicted RBP22.17■■□□□ 1.14
CBWD3-202ENST00000377342 FAM131BQ86XD5 332 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 WBP2Q969T9 261 aa22.17■■□□□ 1.14
CBWD3-202ENST00000377342 FCRL2Q96LA5 508 aaPredicted RBP22.17■■□□□ 1.14
CBWD3-202ENST00000377342 SLITRK6Q9H5Y7 841 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms