RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 PCDHA5Q9Y5H7 936 aa13.86□□□□□ -0.19
CLCN6-205ENST00000376492 WASH3PC4AMC7 463 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 ZBTB24O43167 697 aaPredicted RBP13.85□□□□□ -0.19
CLCN6-205ENST00000376492 TLR5O60602 858 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 EXOC3O60645 756 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 CBFA2T3O75081 653 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 NDUFS2O75306 463 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 TBX18O95935 607 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 CASP4P49662 377 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 ORC1Q13415 861 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 COBLL1Q53SF7 1204 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 SDE2Q6IQ49 451 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 SCARA5Q6ZMJ2 495 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 NUDT18Q6ZVK8 323 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 SLCO6A1Q86UG4 719 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 ZMIZ2Q8NF64 920 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 P2RY11Q96G91 374 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 SMARCD1Q96GM5 515 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
CLCN6-205ENST00000376492 SDCBP2Q9H190 292 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 FAM124BQ9H5Z6 455 aaPredicted RBP13.85□□□□□ -0.19
CLCN6-205ENST00000376492 CCDC86Q9H6F5 360 aaKnown RBP13.85□□□□□ -0.19
CLCN6-205ENST00000376492 IL21RQ9HBE5 538 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 RAXQ9Y2V3 346 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 APC2O95996 2303 aa13.85□□□□□ -0.19
CLCN6-205ENST00000376492 GCN1Q92616 2671 aaKnown RBP13.84□□□□□ -0.19
CLCN6-205ENST00000376492 FAM92AA1XBS5 289 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 CALUO43852 315 aaPredicted RBP13.84□□□□□ -0.19
CLCN6-205ENST00000376492 AP1G2O75843 785 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 BEST1O76090 585 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 LETM1O95202 739 aaPredicted RBP13.84□□□□□ -0.19
CLCN6-205ENST00000376492 NR3C1P04150 777 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 FAM163BP0C2L3 166 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 CCDC130P13994 396 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 GNSP15586 552 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 CLDN10P78369 228 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 TRPC3Q13507 836 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 SYCP2LQ5T4T6 812 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 ZNF658Q5TYW1 1059 aaPredicted RBP13.84□□□□□ -0.19
CLCN6-205ENST00000376492 HTR3DQ70Z44 454 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 MARCH9Q86YJ5 346 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 FUKQ8N0W3 1084 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 ZCCHC9Q8N567 271 aaKnown RBP13.84□□□□□ -0.19
CLCN6-205ENST00000376492 HNRNPLLQ8WVV9 542 aaKnown RBP13.84□□□□□ -0.19
CLCN6-205ENST00000376492 SMARCE1Q969G3 411 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 XPO6Q96QU8 1125 aaKnown RBP13.84□□□□□ -0.19
CLCN6-205ENST00000376492 SMOQ99835 787 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 KLF16Q9BXK1 252 aaPredicted RBP13.84□□□□□ -0.19
CLCN6-205ENST00000376492 OSER1Q9NX31 292 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 MARK1Q9P0L2 795 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 SUSD2Q9UGT4 822 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 HMGXB4Q9UGU5 601 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 PCOLCE2Q9UKZ9 415 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 MAPK8IP1Q9UQF2 711 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 MYO18AQ92614 2054 aaKnown RBP13.84□□□□□ -0.19
CLCN6-205ENST00000376492 ATP8B3O60423 1300 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 ADAMTS20P59510 1910 aa13.84□□□□□ -0.19
CLCN6-205ENST00000376492 MEI4A8MW99 385 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 MDM4O15151 490 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 MAPK13O15264 365 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 CLSTN1O94985 981 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 STAU1O95793 577 aaKnown RBP13.83□□□□□ -0.2
CLCN6-205ENST00000376492 CISD3P0C7P0 127 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 CD6P30203 668 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 DGKGP49619 791 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 FUT11Q495W5 492 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 WDR45BQ5MNZ6 344 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 GPRIN1Q7Z2K8 1008 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 ACOT1Q86TX2 421 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 PLEKHO2Q8TD55 490 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 PARD3BQ8TEW8 1205 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 ERCC4Q92889 916 aaPredicted RBP13.83□□□□□ -0.2
CLCN6-205ENST00000376492 FOXJ1Q92949 421 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 TOE1Q96GM8 510 aaKnown RBP13.83□□□□□ -0.2
CLCN6-205ENST00000376492 BBC3Q96PG8 261 aaPredicted RBP13.83□□□□□ -0.2
CLCN6-205ENST00000376492 MIR1-1HGQ9H1L0 117 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 PLK2Q9NYY3 685 aa13.83□□□□□ -0.2
CLCN6-205ENST00000376492 FNDC3AQ9Y2H6 1198 aaKnown RBP13.83□□□□□ -0.2
CLCN6-205ENST00000376492 CYP26A1O43174 497 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 PHACTR2O75167 634 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 NCAM1P13591 858 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 RPL13P26373 211 aaKnown RBP13.82□□□□□ -0.2
CLCN6-205ENST00000376492 ATICP31939 592 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 PRCPP42785 496 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 MAP3K7CLP57077 242 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 MCCD1P59942 119 aaPredicted RBP13.82□□□□□ -0.2
CLCN6-205ENST00000376492 BNC1Q01954 994 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 ZNF699Q32M78 642 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 EDRF1Q3B7T1 1238 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 ZCWPW2Q504Y3 356 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 GLRX5Q86SX6 157 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 CACUL1Q86Y37 369 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 SMYD4Q8IYR2 804 aaPredicted RBP13.82□□□□□ -0.2
CLCN6-205ENST00000376492 SLC2A14Q8TDB8 520 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 SETD7Q8WTS6 366 aaKnown RBP13.82□□□□□ -0.2
CLCN6-205ENST00000376492 JAKMIP2Q96AA8 810 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 LRIG1Q96JA1 1093 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 GPR174Q9BXC1 333 aa13.82□□□□□ -0.2
CLCN6-205ENST00000376492 MKRN2Q9H000 416 aaKnown RBP13.82□□□□□ -0.2
CLCN6-205ENST00000376492 WSB2Q9NYS7 404 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms