RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FAM47DPA6NHR8 397 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 MDM4O15151 490 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 BUD23O43709 281 aaKnown RBP11.2□□□□□ -0.62
CXCL12-203ENST00000374429 MTA2O94776 668 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 METTL18O95568 372 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 LSM8O95777 96 aaKnown RBP11.2□□□□□ -0.62
CXCL12-203ENST00000374429 LILRA4P59901 499 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 SLC6A3Q01959 620 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 PDCD2Q16342 344 aaPredicted RBP11.2□□□□□ -0.62
CXCL12-203ENST00000374429 CD302Q8IX05 232 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 PPIL6Q8IXY8 311 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 PLD5Q8N7P1 536 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 VCPIP1Q96JH7 1222 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 SPC25Q9HBM1 224 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 PRUNE2Q8WUY3 3088 aa11.2□□□□□ -0.62
CXCL12-203ENST00000374429 CXorf49A8MYA2 514 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 GAS2O43903 313 aaKnown RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 DNAJC6O75061 913 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 SUN1O94901 812 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 BGNP21810 368 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ATP5DP30049 168 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 GRIK1P39086 918 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ZNF132P52740 706 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ZNF143P52747 638 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ATXN3P54252 364 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 HADHBP55084 474 aaKnown RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 CLDN10P78369 228 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 MAP2K5Q13163 448 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 SEPT6Q14141 434 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ANKRD20A8PQ5CZ79 823 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 LDLRAD1Q5T700 205 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 C1QTNF12Q5T7M4 302 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 SPATA21Q7Z572 469 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 OSTM1Q86WC4 334 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ARL10Q8N8L6 244 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ADAM2Q99965 735 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ECT2Q9H8V3 914 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 RSAD1Q9HA92 442 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 YJEFN3A6XGL0 299 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 E7ENQ6 273 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ENDOD1O94919 500 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 AVPR1AP37288 418 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 SCTRP47872 440 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 HDAC4P56524 1084 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 MAMDC4Q6UXC1 1216 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 VPS52Q8N1B4 723 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 B3GALNT2Q8NCR0 500 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 RUBCNQ92622 972 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 SGF29Q96ES7 293 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 AGO3Q9H9G7 860 aaKnown RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 PCDH18Q9HCL0 1135 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ITGA11Q9UKX5 1188 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 PHIPQ8WWQ0 1821 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 C2CD4BA6NLJ0 364 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 NRP1O14786 923 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 NUDT17P0C025 328 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ERVK-10P10266 1014 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 PHBP35232 272 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ETFBP38117 255 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 MMP13P45452 471 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 CACNA2D1P54289 1103 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 WDR4P57081 412 aaKnown RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 GPX6P59796 221 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 USP4Q13107 963 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 TFDP2Q14188 446 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ZNF268Q14587 947 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 TRPM8Q7Z2W7 1104 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 MYLK4Q86YV6 388 aaPredicted RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ZCCHC9Q8N567 271 aaKnown RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 ATP11CQ8NB49 1132 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 BBOF1Q8ND07 529 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 RNF157Q96PX1 679 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 UBQLN1Q9UMX0 589 aaKnown RBP11.19□□□□□ -0.62
CXCL12-203ENST00000374429 SCN1AP35498 2009 aa11.19□□□□□ -0.62
CXCL12-203ENST00000374429 FAM72CH0Y354 149 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 TSPAN3O60637 253 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 AOC2O75106 756 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 KLRC2P26717 231 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 GLRBP48167 497 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 TMPRSS15P98073 1019 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 SLC10A2Q12908 348 aaPredicted RBP11.18□□□□□ -0.62
CXCL12-203ENST00000374429 CYP1B1Q16678 543 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 FAM72AQ5TYM5 149 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 FAM72DQ6L9T8 149 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 DNAJC14Q6Y2X3 702 aaPredicted RBP11.18□□□□□ -0.62
CXCL12-203ENST00000374429 POLNQ7Z5Q5 900 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 FAM72BQ86X60 149 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 EMID1Q96A84 441 aaPredicted RBP11.18□□□□□ -0.62
CXCL12-203ENST00000374429 PGM2Q96G03 612 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 KLC2Q9H0B6 622 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 SLC40A1Q9NP59 571 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.18□□□□□ -0.62
CXCL12-203ENST00000374429 HCSTQ9UBK5 93 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 PHTF1Q9UMS5 762 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 SLC27A5Q9Y2P5 690 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 TCRBV9S1A1TA0A576 114 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 CCL22O00626 93 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 ITGB1P05556 798 aa11.18□□□□□ -0.62
CXCL12-203ENST00000374429 DRG2P55039 364 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms