RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZNF518BQ9C0D4 1074 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 NSMCE4AQ9NXX6 385 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 ACKR2O00590 384 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 RNASEH1O60930 286 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 GALNT6Q8NCL4 622 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 NLGN2Q8NFZ4 835 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 DDI1Q8WTU0 396 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 USP13Q92995 863 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 NEUROG2Q9H2A3 272 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 FANCEQ9HB96 536 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 CLCA2Q9UQC9 943 aa13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 R3HDM2Q9Y2K5 976 aaKnown RBP13.72□□□□□ -0.21
RAPGEF1-201ENST00000372189 ZNF541Q9H0D2 1346 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 MRC1P22897 1456 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 SLC12A8A0AV02 714 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 CCDC85CA6NKD9 419 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 FOXN3O00409 490 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 ZNF263O14978 683 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 AMPD2Q01433 879 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 BST2Q10589 180 aaKnown RBP13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 CXCL17Q6UXB2 119 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 RBM43Q6ZSC3 357 aaKnown RBP13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 AGXT2Q9BYV1 514 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 CCDC78A2IDD5 438 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 WLSQ5T9L3 541 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 TMEM110Q86TL2 294 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 SYT15Q9BQS2 421 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 SEMA6BQ9H3T3 888 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 CHST12Q9NRB3 414 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 CHRAC1Q9NRG0 131 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 PHTF1Q9UMS5 762 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 CNTNAP2Q9UHC6 1331 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 ATF4P18848 351 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 PPIL6Q8IXY8 311 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 KLRG1Q96E93 195 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 CAAP1Q9H8G2 361 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 CASS4Q9NQ75 786 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 CISHQ9NSE2 258 aa13.71□□□□□ -0.21
RAPGEF1-201ENST00000372189 A0A0B4J269 797 aa13.71□□□□□ -0.22
RAPGEF1-201ENST00000372189 CARNS1A5YM72 827 aa13.71□□□□□ -0.22
RAPGEF1-201ENST00000372189 EIF2S3P41091 472 aaKnown RBP13.71□□□□□ -0.22
RAPGEF1-201ENST00000372189 TUBB3Q13509 450 aa13.71□□□□□ -0.22
RAPGEF1-201ENST00000372189 ANKS3Q6ZW76 656 aa13.71□□□□□ -0.22
RAPGEF1-201ENST00000372189 GTF3C4Q9UKN8 822 aa13.71□□□□□ -0.22
RAPGEF1-201ENST00000372189 LZTS3O60299 673 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 NPM3O75607 178 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 SPRP35270 261 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 COPAP53621 1224 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ADRM1Q16186 407 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 PTRHD1Q6GMV3 140 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 MSRAQ9UJ68 235 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 TIMM13Q9Y5L4 95 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 PGK1P00558 417 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 DNAJC3Q13217 504 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 DMC1Q14565 340 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 CHI3L2Q15782 390 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ADAM2Q99965 735 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 THG1LQ9NWX6 298 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 TSC22D2O75157 780 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ANXA9O76027 345 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 CYP11B1P15538 503 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 CCT3P49368 545 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 COL14A1Q05707 1796 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 MAPK7Q13164 816 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 USP10Q14694 798 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 NAPEPLDQ6IQ20 393 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ADCK2Q7Z695 626 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ANKRD23Q86SG2 305 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 DNALI1O14645 258 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 OXCT1P55809 520 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 AASDHQ4L235 1098 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZRANB3Q5FWF4 1079 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZPBP2Q6X784 338 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 SLFN11Q7Z7L1 901 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 VSIG10LQ86VR7 867 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 TAGAPQ8N103 731 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 NUP93Q8N1F7 819 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 TAS1R2Q8TE23 839 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZNF285Q96NJ3 590 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ASB7Q9H672 318 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 DTNAQ9Y4J8 743 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 SH3D21A4FU49 640 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 XPO1O14980 1071 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 CD44P16070 742 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 ZCWPW2Q504Y3 356 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 LINC00523Q86TU6 105 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 COPS5Q92905 334 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 THAP2Q9H0W7 228 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 APPL1Q9UKG1 709 aa13.7□□□□□ -0.22
RAPGEF1-201ENST00000372189 H3BQF6 201 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 PSTPIP1O43586 416 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 XYLBO75191 536 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 SERPIND1P05546 499 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 TKTL1P51854 596 aa13.69□□□□□ -0.22
RAPGEF1-201ENST00000372189 TMEM119Q4V9L6 283 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms