RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 C17orf50Q8WW18 174 aa16.71■□□□□ 0.26
CHD1L-203ENST00000369259 PKP2Q99959 881 aa16.71■□□□□ 0.26
CHD1L-203ENST00000369259 SMYD2Q9NRG4 433 aa16.71■□□□□ 0.26
CHD1L-203ENST00000369259 PNPOQ9NVS9 261 aa16.71■□□□□ 0.26
CHD1L-203ENST00000369259 ZC3H7BQ9UGR2 993 aaKnown RBP16.71■□□□□ 0.26
CHD1L-203ENST00000369259 BCAP29Q9UHQ4 241 aa16.71■□□□□ 0.26
CHD1L-203ENST00000369259 CNOT11Q9UKZ1 510 aaKnown RBP16.71■□□□□ 0.26
CHD1L-203ENST00000369259 CLEC11AQ9Y240 323 aa16.71■□□□□ 0.26
CHD1L-203ENST00000369259 RNF11Q9Y3C5 154 aa16.71■□□□□ 0.26
CHD1L-203ENST00000369259 DDX39AO00148 427 aaKnown RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 DCXO43602 365 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 CFBP00751 764 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 TFPTP0C1Z6 253 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 GABRB2P47870 512 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 NRLP54845 237 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 EIF3EP60228 445 aaKnown RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 FSCBQ5H9T9 825 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 MROH9Q5TGP6 573 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 FOCADQ5VW36 1801 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 ITPRIPL1Q6GPH6 555 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 C15orf39Q6ZRI6 1047 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 POLNQ7Z5Q5 900 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 MAP4K3Q8IVH8 894 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 HSPH1Q92598 858 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 CCDC97Q96F63 343 aaPredicted RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 ZNF512Q96ME7 567 aaPredicted RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 GPRC5CQ9NQ84 441 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 GREB1LQ9C091 1923 aaPredicted RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 TCRBV5S1A1TA0A578 114 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 TOP3BO95985 862 aaKnown RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 SERPINB2P05120 415 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 CALB1P05937 261 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 ZNF12P17014 697 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 RPL10AP62906 217 aaKnown RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 YWHAZP63104 245 aaKnown RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 ZNF423Q2M1K9 1284 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 KCTD21Q4G0X4 260 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 WDR78Q5VTH9 848 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 MIER3Q7Z3K6 550 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 ZNF516Q92618 1163 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 GCOM2Q9BZD3 368 aaPredicted RBP16.7■□□□□ 0.26
CHD1L-203ENST00000369259 DOLKQ9UPQ8 538 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 HEY1Q9Y5J3 304 aa16.7■□□□□ 0.26
CHD1L-203ENST00000369259 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 HMX2A2RU54 273 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 UFL1O94874 794 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 CSH1P0DML2 217 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 CSH2P0DML3 217 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 TUBA4AP68366 448 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 TXNL4AP83876 142 aaKnown RBP16.69■□□□□ 0.26
CHD1L-203ENST00000369259 CBLBQ13191 982 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 SHROOM1Q2M3G4 852 aaPredicted RBP16.69■□□□□ 0.26
CHD1L-203ENST00000369259 STXBP5Q5T5C0 1151 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 VWA5B1Q5TIE3 1220 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 SPOPLQ6IQ16 392 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 RWDD4Q6NW29 188 aaKnown RBP16.69■□□□□ 0.26
CHD1L-203ENST00000369259 NIPA2Q8N8Q9 360 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 BORCS5Q969J3 196 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 ITPKCQ96DU7 683 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 EPS15L1Q9UBC2 864 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 ZNF335Q9H4Z2 1342 aaPredicted RBP16.69■□□□□ 0.26
CHD1L-203ENST00000369259 PRSS51A0A1B0GVH4 220 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 ZNF195O14628 629 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 MCF2LO15068 1137 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 CHADO15335 359 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 SERPINE1P05121 402 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 OCM2P0CE71 109 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 OCMP0CE72 109 aaPredicted RBP16.69■□□□□ 0.26
CHD1L-203ENST00000369259 HMOX2P30519 316 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 BCAP31P51572 246 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 KLF10Q13118 480 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 DCDC5Q6ZRR9 648 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 SMIM5Q71RC9 77 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 THNSL1Q8IYQ7 743 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 UBR7Q8N806 425 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 TMEM161BQ8NDZ6 487 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 DEPTORQ8TB45 409 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 FAF2Q96CS3 445 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 SORT1Q99523 831 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 SH2D3AQ9BRG2 576 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 PLAC1Q9HBJ0 212 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 POPDC2Q9HBU9 364 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 VPS45Q9NRW7 570 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 MYRFQ9Y2G1 1151 aa16.69■□□□□ 0.26
CHD1L-203ENST00000369259 H3BNH8 94 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 ADAM23O75077 832 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 HLA-DRAP01903 254 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 KCNA4P22459 653 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 KDELR1P24390 212 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 NDST2P52849 883 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 SLC5A3P53794 718 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 CUL2Q13617 745 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 SMTNL2Q2TAL5 461 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 TATDN1Q6P1N9 297 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 C16orf89Q6UX73 402 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 SIAH1Q8IUQ4 282 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 GPD1LQ8N335 351 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 DLG3Q92796 817 aa16.68■□□□□ 0.26
CHD1L-203ENST00000369259 RIT2Q99578 217 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms