RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 CLEC4EQ9ULY5 219 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 GUCA1BQ9UMX6 200 aa4.21□□□□□ -1.74
LIG4-201ENST00000356922 MRPS23Q9Y3D9 190 aaKnown RBP4.21□□□□□ -1.74
LIG4-201ENST00000356922 ZDBF2Q9HCK1 2354 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 C2CD4DB7Z1M9 353 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 PJA2O43164 708 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 NCK2O43639 380 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 TRUB2O95900 331 aaKnown RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 C1RP00736 705 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ASGR2P07307 311 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CD48P09326 243 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 TMEM253P0C7T8 217 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 MATKP42679 507 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 VAV2P52735 878 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SLC8A3P57103 927 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 TNK2Q07912 1038 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ADCY2Q08462 1091 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SMTNL2Q2TAL5 461 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 C10orf120Q5SQS8 335 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 NADSYN1Q6IA69 706 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 TRIM72Q6ZMU5 477 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 PDZD4Q76G19 769 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 FMNL3Q8IVF7 1028 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CMTM8Q8IZV2 173 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 LRRC57Q8N9N7 239 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ZSCAN18Q8TBC5 510 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 HDAC7Q8WUI4 952 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 KRT35Q92764 455 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 VCPIP1Q96JH7 1222 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 FBXO44Q9H4M3 255 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 GPATCH2LQ9NWQ4 482 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 PCSK1NQ9UHG2 260 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ANAPC7Q9UJX3 599 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 GRID2IPA4D2P6 1211 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 TMEM110-MUSTN1A8MSY1 372 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 M0QYT0 321 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 RTN3O95197 1032 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 IPO7O95373 1038 aaKnown RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 IRF1P10914 325 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 LAMP2P13473 410 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 FSHRP23945 695 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CYLC1P35663 651 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 VCPP55072 806 aaKnown RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 GSCP56915 257 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 MESDQ14696 234 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ATAT1Q5SQI0 421 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 DNAJC24Q6P3W2 148 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 C14orf80Q86SX3 495 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SFTPA1Q8IWL2 248 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 TP53INP2Q8IXH6 220 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CCAR2Q8N163 923 aaKnown RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 TPCN2Q8NHX9 752 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 TTC8Q8TAM2 541 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ZNF564Q8TBZ8 553 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 LRRN4Q8WUT4 740 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 BHMTQ93088 406 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SLC39A13Q96H72 371 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 RPGRIP1Q96KN7 1286 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 FCRL2Q96LA5 508 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 ASB16Q96NS5 453 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SLITRK1Q96PX8 696 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 WDR24Q96S15 920 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 KLF16Q9BXK1 252 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 PARVAQ9NVD7 372 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 KLHL11Q9NVR0 708 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 TRPM5Q9NZQ8 1165 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CTTNBP2NLQ9P2B4 639 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 LIMD1Q9UGP4 676 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 MAFFQ9ULX9 164 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ASB3Q9Y575 518 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CEP83Q9Y592 693 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CPQQ9Y646 472 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ALG6Q9Y672 507 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ATG2BQ96BY7 2078 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 CLUHO75153 1309 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ENC1O14682 589 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 STC2O76061 302 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ENDOD1O94919 500 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 FTCDO95954 541 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 HOXB8P17481 243 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 COMTP21964 271 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 IL4RP24394 825 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 MIPP30301 263 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SLC6A4P31645 630 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ACADSBP45954 432 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 ZNF143P52747 638 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 VEPH1Q14D04 833 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SLC25A52Q3SY17 297 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 HECTD3Q5T447 861 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 BTBD8Q5XKL5 378 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 RFWD3Q6PCD5 774 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SCML4Q8N228 414 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 OR52K2Q8NGK3 314 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 FAM172AQ8WUF8 416 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SELENOOQ9BVL4 669 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 SLITRK6Q9H5Y7 841 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 AVENQ9NQS1 362 aaPredicted RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 TLR8Q9NR97 1041 aaKnown RBP4.2□□□□□ -1.74
LIG4-201ENST00000356922 ABCC13Q9NSE7 274 aa4.2□□□□□ -1.74
LIG4-201ENST00000356922 NDFIP2Q9NV92 336 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms