RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 BBS12Q6ZW61 710 aa18.65■□□□□ 0.58
CTSB-202ENST00000353047 IFNEQ86WN2 208 aa18.65■□□□□ 0.58
CTSB-202ENST00000353047 DIS3LQ8TF46 1054 aaKnown RBP18.65■□□□□ 0.58
CTSB-202ENST00000353047 PRPF18Q99633 342 aaKnown RBP18.65■□□□□ 0.58
CTSB-202ENST00000353047 TASP1Q9H6P5 420 aa18.65■□□□□ 0.58
CTSB-202ENST00000353047 SNCAIPQ9Y6H5 919 aa18.65■□□□□ 0.58
CTSB-202ENST00000353047 ASS1P00966 412 aaKnown RBP18.64■□□□□ 0.57
CTSB-202ENST00000353047 MX2P20592 715 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 STIP1P31948 543 aaKnown RBP18.64■□□□□ 0.57
CTSB-202ENST00000353047 NAMPTP43490 491 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 SLC12A2P55011 1212 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 TGFB2P61812 414 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 RWDD4Q6NW29 188 aaKnown RBP18.64■□□□□ 0.57
CTSB-202ENST00000353047 MICALL2Q8IY33 904 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 CATSPER2Q96P56 530 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 NUF2Q9BZD4 464 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 DTNAQ9Y4J8 743 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 OR6B1O95007 311 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 ALADP13716 330 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 RTP1P59025 263 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 OASLQ15646 514 aaKnown RBP18.64■□□□□ 0.57
CTSB-202ENST00000353047 C10orf107Q8IVU9 208 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 ECSITQ9BQ95 431 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 PDGFDQ9GZP0 370 aaPredicted RBP18.64■□□□□ 0.57
CTSB-202ENST00000353047 DOCK2Q92608 1830 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 CCDC15Q0P6D6 951 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 SLC12A1Q13621 1099 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 HSP90AA5PQ58FG0 334 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 KBTBD2Q8IY47 623 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 CAAP1Q9H8G2 361 aa18.64■□□□□ 0.57
CTSB-202ENST00000353047 APOEP02649 317 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 RALBP11234 206 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 CYP2F1P24903 491 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 BAG6P46379 1132 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 FLOT2Q14254 428 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 DLG2Q15700 870 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 CYP2R1Q6VVX0 501 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 UNC5AQ6ZN44 842 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 PHC3Q8NDX5 983 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 LPAR1Q92633 364 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 VCPIP1Q96JH7 1222 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 DRG1Q9Y295 367 aaKnown RBP18.63■□□□□ 0.57
CTSB-202ENST00000353047 LRRC42Q9Y546 428 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 PHGDHO43175 533 aaKnown RBP18.63■□□□□ 0.57
CTSB-202ENST00000353047 GNAZP19086 355 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 EPHA3P29320 983 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 PLK1P53350 603 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 AQP4P55087 323 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 SPDYAQ5MJ70 313 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.63■□□□□ 0.57
CTSB-202ENST00000353047 LCA5Q86VQ0 697 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 ZNF280CQ8ND82 737 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 SLC44A1Q8WWI5 657 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 SLCO2A1Q92959 643 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 PANX3Q96QZ0 392 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 C17orf75Q9HAS0 396 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 ETNK2Q9NVF9 386 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 HNRNPCL1O60812 293 aaKnown RBP18.63■□□□□ 0.57
CTSB-202ENST00000353047 TFE3P19532 575 aaPredicted RBP18.63■□□□□ 0.57
CTSB-202ENST00000353047 PTGER2P43116 358 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 YWHAZP63104 245 aaKnown RBP18.63■□□□□ 0.57
CTSB-202ENST00000353047 EN1Q05925 392 aaPredicted RBP18.63■□□□□ 0.57
CTSB-202ENST00000353047 TRMT5Q32P41 509 aaKnown RBP18.63■□□□□ 0.57
CTSB-202ENST00000353047 FAM183BPQ6ZVS7 135 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 FBXO16Q8IX29 292 aaPredicted RBP18.63■□□□□ 0.57
CTSB-202ENST00000353047 CDRT15Q96T59 188 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 ATXN3LQ9H3M9 355 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 ARHGAP28Q9P2N2 729 aa18.63■□□□□ 0.57
CTSB-202ENST00000353047 A0A087WZ62 844 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 HCRTO43612 131 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 GARSP41250 739 aaKnown RBP18.62■□□□□ 0.57
CTSB-202ENST00000353047 SNRPFP62306 86 aaKnown RBP18.62■□□□□ 0.57
CTSB-202ENST00000353047 TAP1Q03518 808 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 PRPSAP1Q14558 356 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 DBN1Q16643 649 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 JADE1Q6IE81 842 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 DPY19L2Q6NUT2 758 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 BRSK2Q8IWQ3 736 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 PYROXD2Q8N2H3 581 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 NAT8LQ8N9F0 302 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 GPRASP2Q96D09 838 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 FDXACB1Q9BRP7 624 aaPredicted RBP18.62■□□□□ 0.57
CTSB-202ENST00000353047 PORCNQ9H237 461 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 AS3MTQ9HBK9 375 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 STX18Q9P2W9 335 aaKnown RBP18.62■□□□□ 0.57
CTSB-202ENST00000353047 AURKCQ9UQB9 309 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 LACTBL1A8MY62 500 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 AMHP03971 560 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 SPDYE2Q495Y8 402 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 ANGEL2Q5VTE6 544 aaKnown RBP18.62■□□□□ 0.57
CTSB-202ENST00000353047 SATL1Q86VE3 508 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 EME1Q96AY2 570 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 TMEM176AQ96HP8 235 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 ETAA1Q9NY74 926 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 KCNG1Q9UIX4 513 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 SPATA31A6Q5VVP1 1343 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 SIGLEC16A6NMB1 481 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 GSTA2P09210 222 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 STAG3L1P0CL83 205 aa18.62■□□□□ 0.57
CTSB-202ENST00000353047 SRGAP2BP0DMP2 458 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms