RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 PROS1P07225 676 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 SERPINF2P08697 491 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 TRIM49P0CI25 452 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 TRIM49CP0CI26 452 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 NDUFA8P51970 172 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 PPP3CAQ08209 521 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 DPYDQ12882 1025 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 ZNF394Q53GI3 561 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 PPP1R26Q5T8A7 1209 aaPredicted RBP13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 PEAR1Q5VY43 1037 aaPredicted RBP13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 KRBA2Q6ZNG9 492 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 MIB1Q86YT6 1006 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 RGL4Q8IZJ4 473 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 FOXJ1Q92949 421 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 TMEM176AQ96HP8 235 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 GABRG3Q99928 467 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 GTPBP2Q9BX10 602 aaKnown RBP13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 APOBEC3GQ9HC16 384 aaKnown RBP13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 SUSD2Q9UGT4 822 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 RALYQ9UKM9 306 aaKnown RBP13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 USP3Q9Y6I4 520 aa13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 ANKRD11Q6UB99 2663 aaPredicted RBP13.72□□□□□ -0.21
NECTIN1-203ENST00000341398 IGHV1OR15-9A0A0B4J2B8 117 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 FAM237AA0A1B0GTK4 181 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 UPK3BL1B0FP48 263 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 PRRT4C9JH25 899 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 UPK3BL2E5RIL1 263 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 MDM4O15151 490 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 CETN3O15182 167 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 OPHN1O60890 802 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 CISD3P0C7P0 127 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 EPB41P11171 864 aaKnown RBP13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 GNSP15586 552 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 HNRNPDQ14103 355 aaKnown RBP13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 EDRF1Q3B7T1 1238 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 WDR45BQ5MNZ6 344 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 Q6ZNB5 142 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 RSRC2Q7L4I2 434 aaKnown RBP13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 DEFB119Q8N690 84 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 FBXL13Q8NEE6 735 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 DEFB124Q8NES8 71 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 BHMTQ93088 406 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 ACOX2Q99424 681 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 RAB20Q9NX57 234 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 PLK2Q9NYY3 685 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 RASAL2Q9UJF2 1139 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 FBXO10Q9UK96 956 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 CYP8B1Q9UNU6 501 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 SLC27A6Q9Y2P4 619 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 PKD1L2Q7Z442 2459 aa13.71□□□□□ -0.21
NECTIN1-203ENST00000341398 ATXN2Q99700 1313 aaKnown RBP13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 A0A1W2PQ27 194 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 A0A1W2PQ64 194 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 A0A1W2PQD8 194 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 ZNF202O95125 648 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 NDUFV2P19404 249 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 MXI1P50539 228 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 YWHAEP62258 255 aaKnown RBP13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 EFEMP1Q12805 493 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 KIAA1324Q6UXG2 1013 aaKnown RBP13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 UNQ6494/PRO21346Q6UXR6 183 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 TOGARAM2Q6ZUX3 1019 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 SCD5Q86SK9 330 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 TRIML1Q8N9V2 468 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 CISHQ9NSE2 258 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 RMND1Q9NWS8 449 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 CACNA2D2Q9NY47 1150 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 HCN2Q9UL51 889 aa13.71□□□□□ -0.22
NECTIN1-203ENST00000341398 TMEM8BA6NDV4 472 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 ARHGAP33O14559 1287 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 TIMM44O43615 452 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 SYNCRIPO60506 623 aaKnown RBP13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 HMBSP08397 361 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 CORO1AP31146 461 aaKnown RBP13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 ARID5AQ03989 594 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 SEMA3BQ13214 749 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 KIAA1211LQ6NV74 962 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 METTL3Q86U44 580 aaKnown RBP13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 ANKRD52Q8NB46 1076 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 ZNF419Q96HQ0 510 aaPredicted RBP13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 MRGPRX1Q96LB2 322 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 HSPA12BQ96MM6 686 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 TSG101Q99816 390 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 SLC2A11Q9BYW1 496 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 ADAM33Q9BZ11 813 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 PRDM16Q9HAZ2 1276 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 CAPN10Q9HC96 672 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 OLA1Q9NTK5 396 aaKnown RBP13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 MARCH2Q9P0N8 246 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 HESX1Q9UBX0 185 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 STON1Q9Y6Q2 735 aa13.7□□□□□ -0.22
NECTIN1-203ENST00000341398 SLC12A8A0AV02 714 aa13.69□□□□□ -0.22
NECTIN1-203ENST00000341398 WASH3PC4AMC7 463 aa13.69□□□□□ -0.22
NECTIN1-203ENST00000341398 H0Y626 953 aa13.69□□□□□ -0.22
NECTIN1-203ENST00000341398 TRIM16O95361 564 aa13.69□□□□□ -0.22
NECTIN1-203ENST00000341398 PENKP01210 267 aaPredicted RBP13.69□□□□□ -0.22
NECTIN1-203ENST00000341398 ACADMP11310 421 aa13.69□□□□□ -0.22
NECTIN1-203ENST00000341398 CD6P30203 668 aa13.69□□□□□ -0.22
NECTIN1-203ENST00000341398 OXTRP30559 389 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms