RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CACNA1IQ9P0X4 2223 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 GRAP2O75791 330 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 TPM3P06753 285 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 CORO1AP31146 461 aaKnown RBP15.92■□□□□ 0.14
UBE3B-201ENST00000340074 AMPD2Q01433 879 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 SLC6A3Q01959 620 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 FZD5Q13467 585 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 EFHC1Q5JVL4 640 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 LY6G5CQ5SRR4 150 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 NAIF1Q69YI7 327 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-201ENST00000340074 BEND5Q7L4P6 421 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 DENND1CQ8IV53 801 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 DQX1Q8TE96 717 aaKnown RBP15.92■□□□□ 0.14
UBE3B-201ENST00000340074 PLD4Q96BZ4 506 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 AGPAT1Q99943 283 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 TRIM62Q9BVG3 475 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 EDEM3Q9BZQ6 932 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 DCLK3Q9C098 648 aa15.92■□□□□ 0.14
UBE3B-201ENST00000340074 CBFA2T2O43439 604 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 HSF2BPO75031 334 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 ADH1CP00326 375 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 GLI1P08151 1106 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 ADH5P11766 374 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 UNGP13051 313 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-201ENST00000340074 TRIP4Q15650 581 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-201ENST00000340074 ASIC2Q16515 512 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 GAB4Q2WGN9 574 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 DCAF6Q58WW2 860 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 SFMBT2Q5VUG0 894 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 E4F1Q66K89 784 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-201ENST00000340074 TOGARAM2Q6ZUX3 1019 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 XYLT1Q86Y38 959 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 TMEM25Q86YD3 366 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 ZDHHC17Q8IUH5 632 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 MSANTD4Q8NCY6 345 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 SLC30A5Q8TAD4 765 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 ADAM32Q8TC27 787 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 SPHK2Q9NRA0 654 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 SEPT11Q9NVA2 429 aaKnown RBP15.91■□□□□ 0.14
UBE3B-201ENST00000340074 ASNSD1Q9NWL6 643 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 AIPL1Q9NZN9 384 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 DLGAP2Q9P1A6 1054 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 AGO1Q9UL18 857 aaKnown RBP15.91■□□□□ 0.14
UBE3B-201ENST00000340074 ZNF510Q9Y2H8 683 aa15.91■□□□□ 0.14
UBE3B-201ENST00000340074 MYO18AQ92614 2054 aaKnown RBP15.9■□□□□ 0.14
UBE3B-201ENST00000340074 A0A1W2PQJ5 194 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 TRDMT1O14717 391 aaKnown RBP15.9■□□□□ 0.14
UBE3B-201ENST00000340074 NCAM2O15394 837 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 IGLV3-27P01718 113 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 CHRNB1P11230 501 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 MMP8P22894 467 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 HARS2P49590 506 aaKnown RBP15.9■□□□□ 0.14
UBE3B-201ENST00000340074 GALK1P51570 392 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 CLEC16AQ2KHT3 1053 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 ANO4Q32M45 955 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 TPGS1Q6ZTW0 290 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 SLC26A9Q7LBE3 791 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 TAC4Q86UU9 113 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 DEFB106AQ8N104 65 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 CPLX3Q8WVH0 158 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 CLDN23Q96B33 292 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 SERPINB11Q96P15 392 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 SLC2A13Q96QE2 648 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 P2RY13Q9BPV8 354 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 SYT11Q9BT88 431 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 LMAN1LQ9HAT1 526 aa15.9■□□□□ 0.14
UBE3B-201ENST00000340074 FBRSL1Q9HCM7 1045 aaKnown RBP15.9■□□□□ 0.14
UBE3B-201ENST00000340074 ITIH6Q6UXX5 1313 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 GYPCP04921 128 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 OPRD1P41143 372 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 TBX4P57082 545 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 PITX1P78337 314 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-201ENST00000340074 CENPCQ03188 943 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 GAD2Q05329 585 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 TMEM196Q5HYL7 178 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 FAM102AQ5T9C2 384 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-201ENST00000340074 MMS22LQ6ZRQ5 1243 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 C12orf40Q86WS4 652 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 ZNF397Q8NF99 534 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-201ENST00000340074 CD101Q93033 1021 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 RBSNQ9H1K0 784 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 HAUS4Q9H6D7 363 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 RBM12Q9NTZ6 932 aaKnown RBP15.89■□□□□ 0.13
UBE3B-201ENST00000340074 CAPN11Q9UMQ6 739 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 TLR6Q9Y2C9 796 aa15.89■□□□□ 0.13
UBE3B-201ENST00000340074 GOLGA8SH3BPF8 625 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 DAB1O75553 588 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 TRUB2O95900 331 aaKnown RBP15.88■□□□□ 0.13
UBE3B-201ENST00000340074 IGLV3-25P01717 112 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 SKILP12757 684 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 COL9A1P20849 921 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 TNFAIP3P21580 790 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 PRKCIP41743 596 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 NSFP46459 744 aaKnown RBP15.88■□□□□ 0.13
UBE3B-201ENST00000340074 RPS9P46781 194 aaKnown RBP15.88■□□□□ 0.13
UBE3B-201ENST00000340074 SLC6A11P48066 632 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 RNASE9P60153 205 aaKnown RBP15.88■□□□□ 0.13
UBE3B-201ENST00000340074 RING1Q06587 406 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 GRSF1Q12849 480 aaKnown RBP eCLIP15.88■□□□□ 0.13
UBE3B-201ENST00000340074 CCINQ13939 588 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms