RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 TMEM39AQ9NV64 488 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PSD3Q9NYI0 1048 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 PCDH10Q9P2E7 1040 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 TRHDEQ9UKU6 1024 aa6.22□□□□□ -1.41
SEC22A-201ENST00000309934 GOLGA8QA0A0J9YX86 632 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 GOLGA8OA6NCC3 632 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 TMEM191CA6NGB0 347 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 GOLGA8NF8WBI6 632 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 O00370 1275 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 EEF2KO00418 725 aaKnown RBP6.21□□□□□ -1.41
SEC22A-201ENST00000309934 FSCN2O14926 492 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 B4GALT5O43286 388 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 UNGP13051 313 aaPredicted RBP6.21□□□□□ -1.41
SEC22A-201ENST00000309934 CXCR5P32302 372 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 TNFSF9P41273 254 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 PLTPP55058 493 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 MUM1Q2TAK8 710 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 HIBCHQ6NVY1 386 aaPredicted RBP6.21□□□□□ -1.41
SEC22A-201ENST00000309934 BEND5Q7L4P6 421 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 SLC26A9Q7LBE3 791 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 TAS1R3Q7RTX0 852 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 CTU1Q7Z7A3 348 aaKnown RBP6.21□□□□□ -1.41
SEC22A-201ENST00000309934 SCN4BQ8IWT1 228 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 MREGQ8N565 214 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 ZNF558Q96NG5 402 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 SMC6Q96SB8 1091 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 EMILIN2Q9BXX0 1053 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 DPH5Q9H2P9 285 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 PADI3Q9ULW8 664 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 USP18Q9UMW8 372 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 ZNF510Q9Y2H8 683 aa6.21□□□□□ -1.41
SEC22A-201ENST00000309934 REXO2Q9Y3B8 237 aaKnown RBP6.21□□□□□ -1.41
SEC22A-201ENST00000309934 ZNF236Q9UL36 1845 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 NCK2O43639 380 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 GPR32O75388 356 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 VNN1O95497 513 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 LCP1P13796 627 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 ASPAP45381 313 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 SLC11A2P49281 568 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 EIF2B5Q13144 721 aaKnown RBP6.21□□□□□ -1.42
SEC22A-201ENST00000309934 PTK6Q13882 451 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 RABGAP1LQ5R372 815 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 RTL10Q7L3V2 364 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 CREG2Q8IUH2 290 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 SLC4A11Q8NBS3 891 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 CEP70Q8NHQ1 597 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 AP1M1Q9BXS5 423 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 NUF2Q9BZD4 464 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 SENP6Q9GZR1 1112 aaPredicted RBP6.21□□□□□ -1.42
SEC22A-201ENST00000309934 ZCWPW1Q9H0M4 648 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 DHX35Q9H5Z1 703 aaKnown RBP6.21□□□□□ -1.42
SEC22A-201ENST00000309934 KRT82Q9NSB4 513 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 LMCD1Q9NZU5 365 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 EME2A4GXA9 379 aaPredicted RBP6.21□□□□□ -1.42
SEC22A-201ENST00000309934 ARHGAP42A6NI28 874 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 TISP43B9A030 160 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 APOC4-APOC2K7ER74 178 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 KRT37O76014 449 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 ANXA9O76027 345 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 AGTP01019 485 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 APOC2P02655 101 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 KRT4P19013 534 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 PLA2G4AP47712 749 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 GABRB2P47870 512 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 CEP78Q5JTW2 689 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 SPOPLQ6IQ16 392 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 ZCCHC8Q6NZY4 707 aaKnown RBP6.21□□□□□ -1.42
SEC22A-201ENST00000309934 CNKSR3Q6P9H4 555 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 CRELD2Q6UXH1 353 aaPredicted RBP6.21□□□□□ -1.42
SEC22A-201ENST00000309934 NUDT18Q6ZVK8 323 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 ECHDC2Q86YB7 292 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 HERC6Q8IVU3 1022 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 SCML4Q8N228 414 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 LRRC57Q8N9N7 239 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 PPP1R14CQ8TAE6 165 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 MYCBPAPQ8TBZ2 947 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 PYROXD1Q8WU10 500 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 ZNF668Q96K58 619 aaPredicted RBP6.21□□□□□ -1.42
SEC22A-201ENST00000309934 PTPN18Q99952 460 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 TRIM31Q9BZY9 425 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 SLC7A5P2Q9GIP4 190 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 ERVK-5Q9HDB9 667 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 GDF3Q9NR23 364 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 RGS18Q9NS28 235 aa6.21□□□□□ -1.42
SEC22A-201ENST00000309934 MAGEB16A2A368 324 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 RASGRF2O14827 1237 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 MDM4O15151 490 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 MGEA5O60502 916 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 BAIAP3O94812 1187 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CYBBP04839 570 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 INHBAP08476 426 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 PDHA1P08559 390 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CES1P23141 567 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 CNTFP26441 200 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 RAD23BP54727 409 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 EPHB3P54753 998 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 VCPP55072 806 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 TBL3Q12788 808 aaKnown RBP6.2□□□□□ -1.42
SEC22A-201ENST00000309934 RALGDSQ12967 914 aa6.2□□□□□ -1.42
SEC22A-201ENST00000309934 USP41Q3LFD5 358 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms