RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PLA2G12BQ9BX93 195 aa12.4□□□□□ -0.43
PCF11-201ENST00000298281 NCKAP1Q9Y2A7 1128 aa12.4□□□□□ -0.43
PCF11-201ENST00000298281 TMEM253P0C7T8 217 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 SLC11A2P49281 568 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 CCNG1P51959 295 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 BAATQ14032 418 aaPredicted RBP12.39□□□□□ -0.43
PCF11-201ENST00000298281 DCAF6Q58WW2 860 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 CD302Q8IX05 232 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 BBS4Q96RK4 519 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 IDI2Q9BXS1 227 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 TMEM117Q9H0C3 514 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 PCMTD2Q9NV79 361 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 ENDOD1O94919 500 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 MAPK1P28482 360 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 EPHA10Q5JZY3 1008 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 CPA5Q8WXQ8 436 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 CCT8L2Q96SF2 557 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 TBKBP1A7MCY6 615 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 ZNF862O60290 1169 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 CHN1P15882 459 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 SKP1P63208 163 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 MYBPC1Q00872 1141 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 KYNUQ16719 465 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 FAAH2Q6GMR7 532 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 REEP2Q9BRK0 252 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 LRRC1Q9BTT6 524 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 CHST12Q9NRB3 414 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 HECW2Q9P2P5 1572 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 NR3C2P08235 984 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 STAG3L1P0CL83 205 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 RBP3P10745 1247 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 MAGEA4P43358 317 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
PCF11-201ENST00000298281 TSNQ15631 228 aaKnown RBP12.39□□□□□ -0.43
PCF11-201ENST00000298281 SRBD1Q8N5C6 995 aaKnown RBP12.39□□□□□ -0.43
PCF11-201ENST00000298281 EPS8L2Q9H6S3 715 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 SRP54P61011 504 aaKnown RBP12.39□□□□□ -0.43
PCF11-201ENST00000298281 GRIK3Q13003 919 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 C2CD6Q53TS8 623 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 SPANXN2Q5MJ10 180 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 SLC30A5Q8TAD4 765 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 FAM172AQ8WUF8 416 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 TMEM169Q96HH4 297 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.39□□□□□ -0.432e-39■□□□□ 9.9
PCF11-201ENST00000298281 ARHGEF40Q8TER5 1519 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 NUP107P57740 925 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 DLG1Q12959 904 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 TMEM143Q96AN5 459 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 NSUN4Q96CB9 384 aaKnown RBP12.39□□□□□ -0.43
PCF11-201ENST00000298281 DHRS1Q96LJ7 313 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 NAGPAQ9UK23 515 aa12.39□□□□□ -0.43
PCF11-201ENST00000298281 MSH4O15457 936 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 BLOC1S5Q8TDH9 187 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 RASSF5Q8WWW0 418 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 SERPINB12Q96P63 405 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 STX7O15400 261 aaKnown RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 ODC1P11926 461 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCF11-201ENST00000298281 LRRC70Q7Z2Q7 622 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 PRPF39Q86UA1 669 aaKnown RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 FEZF2Q8TBJ5 459 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 TFB1MQ8WVM0 346 aaKnown RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 UNKQ9C0B0 810 aaKnown RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 MANSC1Q9H8J5 431 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 AAR2Q9Y312 384 aaKnown RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 MAP3K4Q9Y6R4 1608 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 LCA5LO95447 670 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 NDUFB10O96000 172 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 F9P00740 461 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 PTSQ03393 145 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 CLEC17AQ6ZS10 378 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 TRMT11Q7Z4G4 463 aaKnown RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 RASGEF1AQ8N9B8 481 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 ENKURQ8TC29 256 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 KAT2BQ92831 832 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 HPS3Q969F9 1004 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 E2F7Q96AV8 911 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 SEC16BQ96JE7 1060 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 ZNF512BQ96KM6 892 aaPredicted RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 PHF20Q9BVI0 1012 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 EMILIN2Q9BXX0 1053 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 ILKAPQ9H0C8 392 aaPredicted RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 KCTD10Q9H3F6 313 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 VCPKMTQ9H867 229 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 THG1LQ9NWX6 298 aaKnown RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 EIF3HO15372 352 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCF11-201ENST00000298281 HLA-DRAP01903 254 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 LONP2Q86WA8 852 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 QKIQ96PU8 341 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCF11-201ENST00000298281 ERP44Q9BS26 406 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 WBP11Q9Y2W2 641 aaKnown RBP12.38□□□□□ -0.43
PCF11-201ENST00000298281 H7C4K7 107 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 EGFRP00533 1210 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 RPA1P27694 616 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 TAF6P49848 677 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 NME5P56597 212 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 VAC14Q08AM6 782 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 ACAP2Q15057 778 aa12.38□□□□□ -0.43
PCF11-201ENST00000298281 TDRPQ86YL5 185 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms