RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 TNNI1P19237 187 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 IDH3AP50213 366 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 MAPK10P53779 464 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 PHEXP78562 749 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 UGCGQ16739 394 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 SEZ6Q53EL9 994 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 TEDDM1Q5T9Z0 273 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 TSPAN14Q8NG11 270 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 TEKT1Q969V4 418 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 TBC1D22BQ9NU19 505 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 PSMD13Q9UNM6 376 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 COQ4Q9Y3A0 265 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 TEX264Q9Y6I9 313 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 SERPINB7O75635 380 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 FOSP01100 380 aaPredicted RBP13.93□□□□□ -0.18
SKA3-201ENST00000298260 PORP16435 677 aaPredicted RBP13.93□□□□□ -0.18
SKA3-201ENST00000298260 RARRES1P49788 294 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 NUDT2P50583 147 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 KPNA1P52294 538 aaPredicted RBP13.93□□□□□ -0.18
SKA3-201ENST00000298260 NR1H2P55055 460 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 RELAQ04206 551 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 SLC10A2Q12908 348 aaPredicted RBP13.93□□□□□ -0.18
SKA3-201ENST00000298260 TGFBIQ15582 683 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 XKR5Q6UX68 686 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 WDR75Q8IWA0 830 aaKnown RBP13.93□□□□□ -0.18
SKA3-201ENST00000298260 SLF2Q8IX21 1173 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 KIAA0319LQ8IZA0 1049 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 ABRAQ8N0Z2 381 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 PAIP1Q9H074 479 aaKnown RBP13.93□□□□□ -0.18
SKA3-201ENST00000298260 ZNF358Q9NW07 568 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 FETUBQ9UGM5 382 aa13.93□□□□□ -0.18
SKA3-201ENST00000298260 RBMX2Q9Y388 322 aaKnown RBP13.93□□□□□ -0.18
SKA3-201ENST00000298260 SH3PXD2BA1X283 911 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 C7orf72A4D263 438 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 TMEM247A6NEH6 219 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 POLRMTO00411 1230 aaKnown RBP13.92□□□□□ -0.18
SKA3-201ENST00000298260 FBP2O00757 339 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 GSRP00390 522 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 ADORA2AP29274 412 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 SLC1A6P48664 564 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 ACOT2P49753 483 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 EIF3EP60228 445 aaKnown RBP13.92□□□□□ -0.18
SKA3-201ENST00000298260 PFKPQ01813 784 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 CYP24A1Q07973 514 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 CEP55Q53EZ4 464 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 RAB6CQ53S08 254 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 DCAF6Q58WW2 860 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 MPP5Q8N3R9 675 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 BSNDQ8WZ55 320 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 IRGQQ8WZA9 623 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 LENG8Q96PV6 779 aaPredicted RBP13.92□□□□□ -0.18
SKA3-201ENST00000298260 PPP1R10Q96QC0 940 aaKnown RBP13.92□□□□□ -0.18
SKA3-201ENST00000298260 WRNIP1Q96S55 665 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 CDRT15Q96T59 188 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 RAB6CQ9H0N0 254 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 ZNF696Q9H7X3 374 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 PARVAQ9NVD7 372 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 IP6K2Q9UHH9 426 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 TNRC6CQ9HCJ0 1690 aaKnown RBP13.92□□□□□ -0.18
SKA3-201ENST00000298260 C3orf70A6NLC5 250 aaPredicted RBP13.92□□□□□ -0.18
SKA3-201ENST00000298260 KRT37O76014 449 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 HLA-DRAP01903 254 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 P4HBP07237 508 aaKnown RBP13.92□□□□□ -0.18
SKA3-201ENST00000298260 XIAPP98170 497 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 WASHC5Q12768 1159 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 MIER3Q7Z3K6 550 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 AHI1Q8N157 1196 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 CERS5Q8N5B7 392 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 ARFGAP1Q8N6T3 406 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 JADE3Q92613 823 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 PGLYRP2Q96PD5 576 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 CALN1Q9BXU9 219 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 WDR11Q9BZH6 1224 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 THAP1Q9NVV9 213 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 ZC3H7BQ9UGR2 993 aaKnown RBP13.92□□□□□ -0.18
SKA3-201ENST00000298260 TBX20Q9UMR3 447 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 CDC14AQ9UNH5 594 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 UBR3Q6ZT12 1888 aa13.92□□□□□ -0.18
SKA3-201ENST00000298260 GAKO14976 1311 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 DDTLA6NHG4 134 aaPredicted RBP13.91□□□□□ -0.18
SKA3-201ENST00000298260 NEMP1O14524 444 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 SPTLC1O15269 473 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 IL1BP01584 269 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 FUCA1P04066 466 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 COX4I1P13073 169 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 ECE1P42892 770 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 GTF2BQ00403 316 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 FLOT2Q14254 428 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 PPP2R5DQ14738 602 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 MFSD4BQ5TF39 518 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 RFX6Q8HWS3 928 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 MYO1HQ8N1T3 1032 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 BHLHE22Q8NFJ8 381 aaPredicted RBP13.91□□□□□ -0.18
SKA3-201ENST00000298260 FAF2Q96CS3 445 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 TRIM11Q96F44 468 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 MARK4Q96L34 752 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 RAB6BQ9NRW1 208 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 POLLQ9UGP5 575 aa13.91□□□□□ -0.18
SKA3-201ENST00000298260 WDR37Q9Y2I8 494 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms