RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 ALDH2P05091 517 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 TBC1D19Q8N5T2 526 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 TNFRSF25Q93038 417 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 SAR1AQ9NR31 198 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 AAR2Q9Y312 384 aaKnown RBP16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 MEI4A8MW99 385 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 PQBP1O60828 265 aaKnown RBP16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 NUDT17P0C025 328 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 PAX7P23759 505 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 ATICP31939 592 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 SLC1A6P48664 564 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 AGAP11Q8TF27 550 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 DDX28Q9NUL7 540 aaKnown RBP16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 SOX13Q9UN79 622 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 PCDHB12Q9Y5F1 795 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZSCAN9O15535 394 aaPredicted RBP16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 DAB1O75553 588 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 FKBP9O95302 570 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 ALADP13716 330 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 CDK16Q00536 496 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 EVX2Q03828 476 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 ITGA9Q13797 1035 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZNF280DQ6N043 979 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 LRRC74BQ6ZQY2 392 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 FKBP9P1Q75LS8 142 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 IRF2BP2Q7Z5L9 587 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 TLK2Q86UE8 772 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 TAGAPQ8N103 731 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 NMD3Q96D46 503 aaKnown RBP16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 CPB2Q96IY4 423 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 TEX12Q9BXU0 123 aa16.51■□□□□ 0.23
ARHGEF28-201ENST00000296794 M0R3G1 203 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 CLASP2O75122 1294 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 SERPINE1P05121 402 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 LAMTOR4Q0VGL1 99 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZNF268Q14587 947 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 LY6KQ17RY6 165 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 CCDC126Q96EE4 140 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 PRPF18Q99633 342 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 UBE2OQ9C0C9 1292 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 TEKT2Q9UIF3 430 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 ACOT9Q9Y305 439 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 ATRNO75882 1429 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 F8VP50 259 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZNF286BP0CG31 522 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 PTPRAP18433 802 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 CHRM3P20309 590 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 KRT72Q14CN4 511 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 SYTL3Q4VX76 610 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 C4orf32Q8N8J7 132 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 SNRNP27Q8WVK2 155 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 FBXO32Q969P5 355 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 THAP1Q9NVV9 213 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 RHBDL2Q9NX52 303 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 CYP1A2P05177 515 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 MAP3K10Q02779 954 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 PPIL2Q13356 520 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 OASLQ15646 514 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 GRIK4Q16099 956 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 ADRM1Q16186 407 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 NIPA1Q7RTP0 329 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 TCF7L2Q9NQB0 619 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 TRPM5Q9NZQ8 1165 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 SLCO1B7G3V0H7 640 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 CALCAP01258 141 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 RAB27AP51159 221 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 DRG2P55039 364 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 POU4F1Q01851 419 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 GRIK5Q16478 980 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 PREPLQ4J6C6 727 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 PTRHD1Q6GMV3 140 aaKnown RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 GPR141Q7Z602 305 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 POU5F2Q8N7G0 328 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 RPRD1AQ96P16 312 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 C10orf88Q9H8K7 445 aa16.5■□□□□ 0.23
ARHGEF28-201ENST00000296794 F9P00740 461 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 VGLL4Q14135 290 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 KCTD19Q17RG1 926 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 FUT11Q495W5 492 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 SGO1Q5FBB7 561 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 IQCKQ8N0W5 287 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 TMEM39AQ9NV64 488 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 PAIP2BQ9ULR5 123 aaKnown RBP16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 STARD13Q9Y3M8 1113 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 SOAT2O75908 522 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 JCHAINP01591 159 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 KCNJ2P63252 427 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZNF177Q13360 481 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 REPS2Q8NFH8 660 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 USP13Q92995 863 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 TSPAN16Q9UKR8 245 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 OPLAHO14841 1288 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 NME5P56597 212 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 ZFPM1Q8IX07 1006 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 KYQ8NBH2 561 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 ART4Q93070 314 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 ECSITQ9BQ95 431 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 CEP41Q9BYV8 373 aa16.49■□□□□ 0.23
ARHGEF28-201ENST00000296794 NCKIPSDQ9NZQ3 722 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms