RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 RASAL2Q9UJF2 1139 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 LSM7Q9UK45 103 aaKnown RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 FBXO10Q9UK96 956 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 AGO1Q9UL18 857 aaKnown RBP10.01□□□□□ -0.81
HMHB1-201ENST00000289448 STARD13Q9Y3M8 1113 aa10.01□□□□□ -0.81
HMHB1-201ENST00000289448 USP24Q9UPU5 2620 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 XPO1O14980 1071 aaKnown RBP10□□□□□ -0.81
HMHB1-201ENST00000289448 PMM2O15305 246 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 ALDH1A2O94788 518 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 CAVIN2O95810 425 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 ZBED1O96006 694 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 PENKP01210 267 aaPredicted RBP10□□□□□ -0.81
HMHB1-201ENST00000289448 VDRP11473 427 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 CD19P15391 556 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 GABRG2P18507 467 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 LIMK1P53667 647 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 STX17P56962 302 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 GOLGA8FQ08AF8 430 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 GOLGA8DPQ0D2H9 430 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 BST2Q10589 180 aaKnown RBP10□□□□□ -0.81
HMHB1-201ENST00000289448 STIM1Q13586 685 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 MAP7D1Q3KQU3 841 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 CCDC40Q4G0X9 1142 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 SGO2Q562F6 1265 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 STPG1Q5TH74 334 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 FYB2Q5VWT5 728 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 TMEM270Q6UE05 265 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 LCLAT1Q6UWP7 414 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 TADA2BQ86TJ2 420 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 ARHGEF19Q8IW93 802 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 C12orf50Q8NA57 414 aaPredicted RBP10□□□□□ -0.81
HMHB1-201ENST00000289448 KCNV2Q8TDN2 545 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 EDEM1Q92611 657 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 GBP4Q96PP9 640 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 XPO6Q96QU8 1125 aaKnown RBP10□□□□□ -0.81
HMHB1-201ENST00000289448 METTL14Q9HCE5 456 aaKnown RBP10□□□□□ -0.81
HMHB1-201ENST00000289448 POLMQ9NP87 494 aaPredicted RBP10□□□□□ -0.81
HMHB1-201ENST00000289448 MARCH2Q9P0N8 246 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 CLEC4EQ9ULY5 219 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 CTNND2Q9UQB3 1225 aa10□□□□□ -0.81
HMHB1-201ENST00000289448 ASPMQ8IZT6 3477 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 SLC12A8A0AV02 714 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 YJEFN3A6XGL0 299 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 PATE3B3GLJ2 98 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 WASH3PC4AMC7 463 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 E7ENQ6 273 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 FOXD2O60548 495 aaPredicted RBP9.99□□□□□ -0.81
HMHB1-201ENST00000289448 TBXAS1P24557 533 aaPredicted RBP9.99□□□□□ -0.81
HMHB1-201ENST00000289448 BRD2P25440 801 aaKnown RBP9.99□□□□□ -0.81
HMHB1-201ENST00000289448 NTSR1P30989 418 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 PTGER3P43115 390 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 DGKGP49619 791 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 RGS7P49802 495 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 BCAT1P54687 386 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 COG7P83436 770 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 ADIGQ0VDE8 80 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 PREPLQ4J6C6 727 aaPredicted RBP9.99□□□□□ -0.81
HMHB1-201ENST00000289448 PPM1JQ5JR12 505 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 BSPRYQ5W0U4 402 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 PMF1Q6P1K2 205 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 FOXR2Q6PJQ5 311 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 CLEC17AQ6ZS10 378 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 RSRC2Q7L4I2 434 aaKnown RBP9.99□□□□□ -0.81
HMHB1-201ENST00000289448 RRAGAQ7L523 313 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 DENND1CQ8IV53 801 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 TRIM59Q8IWR1 403 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 TMEFF1Q8IYR6 380 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 ARHGAP18Q8N392 663 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 SLC35F5Q8WV83 523 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 NT5C1BQ96P26 610 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 MED15Q96RN5 788 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 CDK5RAP1Q96SZ6 601 aaKnown RBP9.99□□□□□ -0.81
HMHB1-201ENST00000289448 SLC6A17Q9H1V8 727 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 CACNA2D2Q9NY47 1150 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 BCCIPQ9P287 314 aaKnown RBP eCLIP9.99□□□□□ -0.81
HMHB1-201ENST00000289448 HESX1Q9UBX0 185 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 SFMBT1Q9UHJ3 866 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 KIAA1257Q9ULG3 409 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 PCDHB4Q9Y5E5 795 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 RAD54BQ9Y620 910 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 SPEGQ15772 3267 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 THADAQ6YHU6 1953 aa9.99□□□□□ -0.81
HMHB1-201ENST00000289448 KMT2BQ9UMN6 2715 aaPredicted RBP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 KNL1Q8NG31 2342 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 LNP1A1A4G5 178 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 GFRA2O00451 464 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 PIK3R2O00459 728 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 ADRB1P08588 477 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 PAEPP09466 180 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 HOXB2P14652 356 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 NDUFV2P19404 249 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 DHPSP49366 369 aaPredicted RBP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 ZNF132P52740 706 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 MFAP3P55082 362 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 SLC8A3P57103 927 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 YWHAEP62258 255 aaKnown RBP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 KCNH2Q12809 1159 aa9.98□□□□□ -0.81
HMHB1-201ENST00000289448 TRIP4Q15650 581 aaPredicted RBP9.98□□□□□ -0.81
HMHB1-201ENST00000289448 CNGA2Q16280 664 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms