RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ETFBKMTQ8IXQ9 262 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 FAM217AQ8IXS0 508 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 AOPEPQ8N6M6 819 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 FLCNQ8NFG4 579 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 CLEC4CQ8WTT0 213 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 IRGQQ8WZA9 623 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 FAM3CQ92520 227 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 SYT11Q9BT88 431 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 CHRDQ9H2X0 955 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 ALG2Q9H553 416 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 TRPC7Q9HCX4 862 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 C2orf42Q9NWW7 574 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 THG1LQ9NWX6 298 aaKnown RBP9.61□□□□□ -0.87
HMGN1-201ENST00000288344 SMPD4Q9NXE4 827 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 TJP2Q9UDY2 1190 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 STOML2Q9UJZ1 356 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 NOCTQ9UK39 431 aaKnown RBP9.61□□□□□ -0.87
HMGN1-201ENST00000288344 FBXO10Q9UK96 956 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 NUDT5Q9UKK9 219 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 HCN2Q9UL51 889 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 LAMA1P25391 3075 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 DCHS1Q96JQ0 3298 aa9.61□□□□□ -0.87
HMGN1-201ENST00000288344 A0A1B0GTH6 734 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 SYCE3A1L190 88 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 F8VZ95 297 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 MDM4O15151 490 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 IGLV3-25P01717 112 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 CYP11B1P15538 503 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 RFX1P22670 979 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 GNA15P30679 374 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 YWHAGP61981 247 aaKnown RBP eCLIP9.6□□□□□ -0.87
HMGN1-201ENST00000288344 ADIGQ0VDE8 80 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 IFRD2Q12894 506 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-201ENST00000288344 DHCR24Q15392 516 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 TRIP4Q15650 581 aaPredicted RBP9.6□□□□□ -0.87
HMGN1-201ENST00000288344 ZSCAN23Q3MJ62 389 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 RNF43Q68DV7 783 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 C1orf228Q6PIY5 440 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 BBS7Q8IWZ6 715 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 SUGP1Q8IWZ8 645 aaKnown RBP9.6□□□□□ -0.87
HMGN1-201ENST00000288344 OTUB2Q96DC9 234 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 PIWIL1Q96J94 861 aaKnown RBP9.6□□□□□ -0.87
HMGN1-201ENST00000288344 TTYH3Q9C0H2 523 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 DNAI2Q9GZS0 605 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 CBX8Q9HC52 389 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 DUS2Q9NX74 493 aaKnown RBP9.6□□□□□ -0.87
HMGN1-201ENST00000288344 MARK1Q9P0L2 795 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 CFAP97Q9P2B7 532 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 HESX1Q9UBX0 185 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
HMGN1-201ENST00000288344 M0QYV0 167 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 PAPSS2O95340 614 aaPredicted RBP9.59□□□□□ -0.87
HMGN1-201ENST00000288344 ABL1P00519 1130 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 CYP17A1P05093 508 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 CISD3P0C7P0 127 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 MBL2P11226 248 aaPredicted RBP9.59□□□□□ -0.87
HMGN1-201ENST00000288344 KRT5P13647 590 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 TRIM21P19474 475 aaKnown RBP9.59□□□□□ -0.87
HMGN1-201ENST00000288344 HOXC13P31276 330 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 GABRB2P47870 512 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 RGS7P49802 495 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 SYCP1Q15431 976 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 TAF5Q15542 800 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 SKOR2Q2VWA4 1001 aaPredicted RBP9.59□□□□□ -0.87
HMGN1-201ENST00000288344 BNIPLQ7Z465 357 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 IRF2BP2Q7Z5L9 587 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 NOP9Q86U38 636 aaKnown RBP9.59□□□□□ -0.87
HMGN1-201ENST00000288344 C12orf40Q86WS4 652 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 TMEM25Q86YD3 366 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 YAF2Q8IY57 180 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 TTC8Q8TAM2 541 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 BAP1Q92560 729 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 NT5C3BQ969T7 300 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 SLC39A13Q96H72 371 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 CPXM1Q96SM3 734 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 PRRX2Q99811 253 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 LSM14BQ9BX40 385 aaKnown RBP9.59□□□□□ -0.87
HMGN1-201ENST00000288344 LMAN1LQ9HAT1 526 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 NAGPAQ9UK23 515 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 DAAM1Q9Y4D1 1078 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 PCDHB3Q9Y5E6 796 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 OTOGLQ3ZCN5 2332 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 KIAA1549LQ6ZVL6 1849 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 DMXL1Q9Y485 3027 aa9.59□□□□□ -0.87
HMGN1-201ENST00000288344 E5RJQ4 531 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 PROB1E7EW31 1015 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 K7EQS6 105 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 K7ESF4 209 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 HOXC11O43248 304 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-201ENST00000288344 FBXO21O94952 628 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 CYP1A1P04798 512 aaPredicted RBP9.58□□□□□ -0.88
HMGN1-201ENST00000288344 MAGEA9P43362 315 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 SLC6A11P48066 632 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 NHLH1Q02575 133 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 PTK2Q05397 1052 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 PTP4A2Q12974 167 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 MTAPQ13126 283 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 PDCLQ13371 301 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 PON2Q15165 354 aa9.58□□□□□ -0.88
HMGN1-201ENST00000288344 NFKBIBQ15653 356 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms