RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ADIPOQQ15848 244 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 TMEM266Q2M3C6 531 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 ZNF674Q2M3X9 581 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 MUM1Q2TAK8 710 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 MBNL2Q5VZF2 373 aaKnown RBP4.92□□□□□ -1.62
CD44-202ENST00000278385 WDR73Q6P4I2 378 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 R3HCC1LQ7Z5L2 792 aaKnown RBP4.92□□□□□ -1.62
CD44-202ENST00000278385 ZZZ3Q8IYH5 903 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 KLHL36Q8N4N3 616 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 TMCO5AQ8N6Q1 288 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 FANCBQ8NB91 859 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 CYP2W1Q8TAV3 490 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 PIGOQ8TEQ8 1089 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 STYXQ8WUJ0 223 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 ARHGEF2Q92974 986 aaKnown RBP4.92□□□□□ -1.62
CD44-202ENST00000278385 EID2BQ96D98 161 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 C16orf45Q96MC5 204 aaPredicted RBP4.92□□□□□ -1.62
CD44-202ENST00000278385 PAIP2Q9BPZ3 127 aaKnown RBP4.92□□□□□ -1.62
CD44-202ENST00000278385 SYT3Q9BQG1 590 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 DDX23Q9BUQ8 820 aaKnown RBP4.92□□□□□ -1.62
CD44-202ENST00000278385 ACAT2Q9BWD1 397 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 TEX13BQ9BXU2 312 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 GPR63Q9BZJ6 419 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 RABEP2Q9H5N1 569 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 ERVMER34-1Q9H9K5 563 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 ADPRHL2Q9NX46 363 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 MCM9Q9NXL9 1143 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 RBPJLQ9UBG7 517 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 NARFQ9UHQ1 456 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 DTNAQ9Y4J8 743 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 B3GALT1Q9Y5Z6 326 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 USP42Q9H9J4 1324 aaKnown RBP4.92□□□□□ -1.62
CD44-202ENST00000278385 LY75O60449 1722 aa4.92□□□□□ -1.62
CD44-202ENST00000278385 CEMIPQ8WUJ3 1361 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 OTOL1A6NHN0 477 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 AKR1B15C9JRZ8 316 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 SPTLC2O15270 562 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 TXNL1O43396 289 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 SNX4O95219 450 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 SLU7O95391 586 aaKnown RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 TNFRSF6BO95407 300 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 C4BPAP04003 597 aaKnown RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 MMEP08473 750 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 HNRNPA1P09651 372 aaKnown RBP eCLIP4.91□□□□□ -1.62
CD44-202ENST00000278385 SNRPA1P09661 255 aaKnown RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 JUPP14923 745 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 LAG3P18627 525 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 TFEBP19484 476 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 TGM1P22735 817 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 CD40P25942 277 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 MAPK3P27361 379 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 SDHAP31040 664 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 RGS2P41220 211 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 FNTBP49356 437 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 MLLT6P55198 1093 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 MC1RQ01726 317 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 ROM1Q03395 351 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 KLHL30Q0D2K2 578 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 NFATC3Q12968 1075 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 SLC14A1Q13336 389 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 SLC12A1Q13621 1099 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 MYBPC3Q14896 1274 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 ANKRD1Q15327 319 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 UGT8Q16880 541 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.91□□□□□ -1.62
CD44-202ENST00000278385 C3orf36Q3SXR2 165 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 CT83Q5H943 113 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 MAP3K21Q5TCX8 1036 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 NFRKBQ6P4R8 1299 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 DCLRE1AQ6PJP8 1040 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 BBS12Q6ZW61 710 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 BEND5Q7L4P6 421 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 NOSTRINQ8IVI9 506 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 TP53I13Q8NBR0 393 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 SYT8Q8NBV8 401 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 ZFAND2BQ8WV99 257 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 THAP4Q8WY91 577 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 ZNF75CPQ92670 426 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 PTP4A1Q93096 173 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 EXOC4Q96A65 974 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 EAF2Q96CJ1 260 aaPredicted RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 CALML4Q96GE6 196 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 BORCS6Q96GS4 357 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 CABS1Q96KC9 395 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 COG8Q96MW5 612 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 TEPSINQ96N21 525 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 TMEM237Q96Q45 408 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 GSDMAQ96QA5 445 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 PLEKHF1Q96S99 279 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 GDF15Q99988 308 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 BTBD2Q9BX70 525 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 ITPAQ9BY32 194 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 DNAI2Q9GZS0 605 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 ARMT1Q9H993 441 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 LIN28AQ9H9Z2 209 aaKnown RBP4.91□□□□□ -1.62
CD44-202ENST00000278385 PDE7BQ9NP56 450 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 UCKL1Q9NWZ5 548 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 IGSF9Q9P2J2 1179 aa4.91□□□□□ -1.62
CD44-202ENST00000278385 MORF4L1Q9UBU8 362 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms