RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 KCNN1Q92952 543 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 ZBED3Q96IU2 234 aaPredicted RBP28.44■■■□□ 2.14
CBX4-201ENST00000269397 THAP1Q9NVV9 213 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 MGAMO43451 1857 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 RGS7P49802 495 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 STAT5BP51692 787 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 CXCL9Q07325 125 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 CNPY1Q3B7I2 92 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 DPY19L2Q6NUT2 758 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 EEPD1Q7L9B9 569 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 TRIM50Q86XT4 487 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 PCDH19Q8TAB3 1148 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 CNPY3Q9BT09 278 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 S100A14Q9HCY8 104 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 NRBP2Q9NSY0 501 aa28.44■■■□□ 2.14
CBX4-201ENST00000269397 PSME4Q14997 1843 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 E2F8A0AVK6 867 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 UBA1P22314 1058 aaKnown RBP28.43■■■□□ 2.14
CBX4-201ENST00000269397 WASHC5Q12768 1159 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 ASPHQ12797 758 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 SFT2D3Q587I9 215 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 PRAMEF18Q5VWM3 479 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 ATG14Q6ZNE5 492 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 FAM183BPQ6ZVS7 135 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 ZNF534Q76KX8 674 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 SIGLEC10Q96LC7 697 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 MAGEB5Q9BZ81 275 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 APOL1O14791 398 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 ITGB3P05106 788 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 EFHC1Q5JVL4 640 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 TMCO4Q5TGY1 634 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 C1orf127Q8N9H9 656 aa28.43■■■□□ 2.14
CBX4-201ENST00000269397 ANKRD33BA6NCL7 494 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 C2CD4BA6NLJ0 364 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 GSRP00390 522 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 EFNA5P52803 228 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 TUBB3Q13509 450 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 NBPF12Q5TAG4 269 aaPredicted RBP28.42■■■□□ 2.14
CBX4-201ENST00000269397 VWA5B1Q5TIE3 1220 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 GSDMBQ8TAX9 411 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 TMEM176AQ96HP8 235 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 NLRP4Q96MN2 994 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 FAM192AQ9GZU8 254 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 MAFO75444 373 aaPredicted RBP28.42■■■□□ 2.14
CBX4-201ENST00000269397 CSDE1O75534 798 aaKnown RBP28.42■■■□□ 2.14
CBX4-201ENST00000269397 PROCP04070 461 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 WDR75Q8IWA0 830 aaKnown RBP28.42■■■□□ 2.14
CBX4-201ENST00000269397 TEX13BQ9BXU2 312 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 BCO2Q9BYV7 579 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 ADAMTS6Q9UKP5 1117 aa28.42■■■□□ 2.14
CBX4-201ENST00000269397 LOC100653049A0A140TA62 436 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.41■■■□□ 2.14
CBX4-201ENST00000269397 INO80B-WBP1J3KQ70 363 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 KRT34O76011 436 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 AOC1P19801 751 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 KYAT3Q6YP21 454 aaKnown RBP28.41■■■□□ 2.14
CBX4-201ENST00000269397 OR6Y1Q8NGX8 325 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 PIWIL2Q8TC59 973 aaKnown RBP28.41■■■□□ 2.14
CBX4-201ENST00000269397 PPP2R3CQ969Q6 453 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 INO80BQ9C086 356 aaPredicted RBP28.41■■■□□ 2.14
CBX4-201ENST00000269397 GPAMQ9HCL2 828 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 MYO18AQ92614 2054 aaKnown RBP28.41■■■□□ 2.14
CBX4-201ENST00000269397 KLHL33A6NCF5 533 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 FAM159BA6NKW6 160 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 ZMPSTE24O75844 475 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 N4BP2L1Q5TBK1 243 aaPredicted RBP28.41■■■□□ 2.14
CBX4-201ENST00000269397 MAP1SQ66K74 1059 aaPredicted RBP28.41■■■□□ 2.14
CBX4-201ENST00000269397 DHDDSQ86SQ9 333 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 AGBL3Q8NEM8 1001 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 FAM172AQ8WUF8 416 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 EBNA1BP2Q99848 306 aaKnown RBP28.41■■■□□ 2.14
CBX4-201ENST00000269397 C1orf21Q9H246 121 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 PNPOQ9NVS9 261 aa28.41■■■□□ 2.14
CBX4-201ENST00000269397 TCF7P36402 384 aaPredicted RBP28.4■■■□□ 2.14
CBX4-201ENST00000269397 ACAP1Q15027 740 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 TEDDM1Q5T9Z0 273 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 CASC4Q6P4E1 433 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 RNF217Q8TC41 542 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 PCDH18Q9HCL0 1135 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 EMCNQ9ULC0 261 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 OPHN1O60890 802 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 CYP3A5P20815 502 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 GABRB2P47870 512 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 SLC1A6P48664 564 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 PRKG1Q13976 671 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 SURF1Q15526 300 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 TCHHL1Q5QJ38 904 aaPredicted RBP28.4■■■□□ 2.14
CBX4-201ENST00000269397 MBLAC2Q68D91 279 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 MAVSQ7Z434 540 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 ZBTB8OSQ8IWT0 167 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 TRAPPC12Q8WVT3 735 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 SPATA16Q9BXB7 569 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 MKS1Q9NXB0 559 aa28.4■■■□□ 2.14
CBX4-201ENST00000269397 APOBEC2Q9Y235 224 aaKnown RBP28.4■■■□□ 2.14
CBX4-201ENST00000269397 IGKV6D-21A0A0A0MT36 114 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 BIRC5O15392 142 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 SIN3BO75182 1162 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 CILPO75339 1184 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 FKBP6O75344 327 aa28.39■■■□□ 2.14
CBX4-201ENST00000269397 FARP2O94887 1054 aaPredicted RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms