RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 ABHD10Q9NUJ1 306 aa13.1□□□□□ -0.31
CLNS1A-201ENST00000263309 TMEM30AQ9NV96 361 aa13.1□□□□□ -0.31
CLNS1A-201ENST00000263309 TJP2Q9UDY2 1190 aa13.1□□□□□ -0.31
CLNS1A-201ENST00000263309 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
CLNS1A-201ENST00000263309 TLR6Q9Y2C9 796 aa13.1□□□□□ -0.31
CLNS1A-201ENST00000263309 TCF20Q9UGU0 1960 aaKnown RBP13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 SSU72P8A0A1W2PR75 194 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 PI4K2BG5E9Z4 385 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 ZBTB24O43167 697 aaPredicted RBP13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 PAPSS1O43252 624 aaPredicted RBP13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 GPR37L1O60883 481 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 OLFM2O95897 454 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 HMBSP08397 361 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 UNGP13051 313 aaPredicted RBP13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 GPC5P78333 572 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 RING1Q06587 406 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 PPP2R5DQ14738 602 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 TRIP4Q15650 581 aaPredicted RBP13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 ANO4Q32M45 955 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 TMEM31Q5JXX7 168 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 VITQ6UXI7 678 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 LRRC31Q6UY01 552 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 FAM183BPQ6ZVS7 135 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 SCD5Q86SK9 330 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 RALGPS2Q86X27 583 aaPredicted RBP13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 CCDC170Q8IYT3 715 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 WDTC1Q8N5D0 677 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 SLC30A5Q8TAD4 765 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 RSAD2Q8WXG1 361 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 CTNNBL1Q8WYA6 563 aaPredicted RBP13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 AZIN2Q96A70 460 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 C11orf70Q9BRQ4 267 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 KLF16Q9BXK1 252 aaPredicted RBP13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 TTYH3Q9C0H2 523 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 SMG9Q9H0W8 520 aaKnown RBP13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 WDCPQ9H6R7 721 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 DONSONQ9NYP3 566 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 HCN4Q9Y3Q4 1203 aa13.09□□□□□ -0.31
CLNS1A-201ENST00000263309 SIGLEC16A6NMB1 481 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 M0QYT0 321 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 IRAK2O43187 625 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 MFAP3LO75121 409 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 DAB1O75553 588 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 PDGFRAP16234 1089 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 HNRNPH3P31942 346 aaKnown RBP13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 SULT1E1P49888 294 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 ADKP55263 362 aaKnown RBP13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 DEUP1Q05D60 604 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 GRSF1Q12849 480 aaKnown RBP eCLIP13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 LRRC32Q14392 662 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 SLC25A52Q3SY17 297 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 MPPE1Q53F39 396 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 ODF2Q5BJF6 829 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 TRIM67Q6ZTA4 783 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 DEFB106AQ8N104 65 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 C3orf20Q8ND61 904 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 CALR3Q96L12 384 aaKnown RBP13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 PANX2Q96RD6 677 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 DNAJC7Q99615 494 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 NMUR1Q9HB89 426 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 CD320Q9NPF0 282 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 DDIT4Q9NX09 232 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 MUC6Q6W4X9 2439 aa13.08□□□□□ -0.32
CLNS1A-201ENST00000263309 SYNJ2BP-COX16A0A087WUM0 186 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 TADA3O75528 432 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 TRUB2O95900 331 aaKnown RBP13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 TBX18O95935 607 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 ERBB2P04626 1255 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 H2AFZP0C0S5 128 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 CHRNB2P17787 502 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 CORO1AP31146 461 aaKnown RBP13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 EIF4A3P38919 411 aaKnown RBP13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 OXCT1P55809 520 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 KRT83P78385 493 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 NME3Q13232 169 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 MLF2Q15773 248 aaPredicted RBP13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 ZNF77Q15935 545 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 PTPN20Q4JDL3 420 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 BRMS1LQ5PSV4 323 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 MSANTD2Q6P1R3 559 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 H2AFVQ71UI9 128 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 ZNF571Q7Z3V5 609 aaPredicted RBP13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 XYLT1Q86Y38 959 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 DENND1CQ8IV53 801 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 MCOLN2Q8IZK6 566 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 SIX5Q8N196 739 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 DDI1Q8WTU0 396 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 FAM3CQ92520 227 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 PBXIP1Q96AQ6 731 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 ZNF653Q96CK0 615 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 TMA16Q96EY4 203 aaKnown RBP13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 BTN2A3PQ96KV6 586 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 SMOC2Q9H3U7 446 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 NHEJ1Q9H9Q4 299 aaPredicted RBP13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 ARHGEF3Q9NR81 526 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 COX16Q9P0S2 106 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 MYO1AQ9UBC5 1043 aa13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 CNOT8Q9UFF9 292 aaKnown RBP13.07□□□□□ -0.32
CLNS1A-201ENST00000263309 SFMBT1Q9UHJ3 866 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms