RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ZSCAN23Q3MJ62 389 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 PASD1Q8IV76 773 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 C1orf131Q8NDD1 294 aaKnown RBP25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 IPO4Q8TEX9 1081 aaKnown RBP25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 PNKPQ96T60 521 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 FBRSL1Q9HCM7 1045 aaKnown RBP25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 NLRC4Q9NPP4 1024 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 RTN4Q9NQC3 1192 aaKnown RBP25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 ASNSD1Q9NWL6 643 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 SFMBT1Q9UHJ3 866 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 PIEZO1Q92508 2521 aa25.43■■□□□ 1.66
SDF2L1-201ENST00000248958 KIAA1549LQ6ZVL6 1849 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 CAPN9O14815 690 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 LATS1O95835 1130 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 GLI1P08151 1106 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 SP9P0CG40 484 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 NCAM1P13591 858 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 CXCL12P48061 93 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 ANO4Q32M45 955 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 TMEM25Q86YD3 366 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 MAML2Q8IZL2 1156 aaPredicted RBP25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 XPO6Q96QU8 1125 aaKnown RBP25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 CPXM1Q96SM3 734 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 FAM126AQ9BYI3 521 aaPredicted RBP25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 POPDC2Q9HBU9 364 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 CBX8Q9HC52 389 aa25.42■■□□□ 1.66
SDF2L1-201ENST00000248958 CACNA1IQ9P0X4 2223 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 CHURC1-FNTBB4DL54 471 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 EPHB6O15197 1021 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 PAPSS2O95340 614 aaPredicted RBP25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 LSM8O95777 96 aaKnown RBP25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 KLKB1P03952 638 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 APODP05090 189 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 RING1Q06587 406 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 GAS6Q14393 721 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 EFHC1Q5JVL4 640 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 ZC3H14Q6PJT7 736 aaKnown RBP25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 NUDT18Q6ZVK8 323 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 ZDHHC17Q8IUH5 632 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 UNC45BQ8IWX7 931 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 CPXM2Q8N436 756 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 DDX1Q92499 740 aaKnown RBP25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 SERPINB11Q96P15 392 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 SYNCQ9H7C4 482 aa25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 AGO1Q9UL18 857 aaKnown RBP25.41■■□□□ 1.66
SDF2L1-201ENST00000248958 A0A0A0MRY4 1105 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 GFPT2O94808 682 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 FYNP06241 537 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 ZNF445P59923 1031 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 YWHAZP63104 245 aaKnown RBP25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 CSTF1Q05048 431 aaKnown RBP25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 NNTQ13423 1086 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 NUGGCQ68CJ6 796 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 NAIF1Q69YI7 327 aaPredicted RBP25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 Q6ZS52 159 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 NOP9Q86U38 636 aaKnown RBP25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 DENND1CQ8IV53 801 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 ETFBKMTQ8IXQ9 262 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 MSANTD4Q8NCY6 345 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 EPS8L1Q8TE68 723 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 BBS2Q9BXC9 721 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 DEC1Q9P2X7 70 aa25.4■■□□□ 1.66
SDF2L1-201ENST00000248958 GOLGA6L19H0YKK7 550 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 RNF40O75150 1001 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 SERPINC1P01008 464 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 CYBBP04839 570 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 NBL1P41271 181 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 GRIA2P42262 883 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 SLC6A11P48066 632 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 NRLP54845 237 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 TPGS1Q6ZTW0 290 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 TOGARAM2Q6ZUX3 1019 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 CACNA2D4Q7Z3S7 1137 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 FAM217AQ8IXS0 508 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 ARHGEF4Q9NR80 690 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 NAALADL1Q9UQQ1 740 aa25.39■■□□□ 1.66
SDF2L1-201ENST00000248958 FANCMQ8IYD8 2048 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 A0A1B0GTH6 734 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 A0A1W2PQC6 194 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 NEDD8-MDP1E9PL57 170 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 TEX33O43247 280 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 CACNG3O60359 315 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 HSF2BPO75031 334 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 KAT7O95251 611 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 CCDC172P0C7W6 258 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 TYRP14679 529 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 TBX4P57082 545 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 TAF3Q5VWG9 929 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 OR6B2Q6IFH4 312 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 C12orf40Q86WS4 652 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 DQX1Q8TE96 717 aaKnown RBP25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 AZIN2Q96A70 460 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 IRX2Q9BZI1 471 aaPredicted RBP25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 STOML2Q9UJZ1 356 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 TLR6Q9Y2C9 796 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 WDFY4Q6ZS81 3184 aa25.38■■□□□ 1.65
SDF2L1-201ENST00000248958 PROB1E7EW31 1015 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 MSI1O43347 362 aaKnown RBP25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 TULP3O75386 442 aa25.37■■□□□ 1.65
SDF2L1-201ENST00000248958 IGLV3-27P01718 113 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms