RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 RPL10AP62906 217 aaKnown RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 PTPN11Q06124 597 aaPredicted RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 PPP3CAQ08209 521 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 TBL3Q12788 808 aaKnown RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 SLC12A1Q13621 1099 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 NFE2Q16621 373 aaPredicted RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 MDH1BQ5I0G3 518 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 ACOT1Q86TX2 421 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 ZNF410Q86VK4 478 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 SLC7A14Q8TBB6 771 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 SPATA18Q8TC71 538 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 EXT2Q93063 718 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 DEFB118Q96PH6 123 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 MANSC1Q9H8J5 431 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 ALG13Q9NP73 1137 aaKnown RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 SARS2Q9NP81 518 aaKnown RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 ETNK2Q9NVF9 386 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 PTTG2Q9NZH5 202 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 ITGA11Q9UKX5 1188 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 RBM47A0AV96 593 aaKnown RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 CBFA2T3O75081 653 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 POMCP01189 267 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 NCAM1P13591 858 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 ANPEPP15144 967 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 TUBP50607 506 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 CHN2P52757 468 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 IKBKEQ14164 716 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 SMTNL2Q2TAL5 461 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 BHMTQ93088 406 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 TMEM176AQ96HP8 235 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 MAF1Q9H063 256 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 TMEM59LQ9UK28 342 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 ZNF232Q9UNY5 417 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 LZTS1Q9Y250 596 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 NEU2Q9Y3R4 380 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 ACTL7BQ9Y614 415 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 SMAPO00193 183 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 PROSCO94903 275 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 CYTH1Q15438 398 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 JADE1Q6IE81 842 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 C11orf63Q6NUN7 778 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 RBM44Q6ZP01 1051 aaKnown RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 REM2Q8IYK8 340 aaPredicted RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 EFHBQ8N7U6 833 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 CDC26Q8NHZ8 85 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 ZNF606Q8WXB4 792 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 PSMC3IPQ9P2W1 217 aaPredicted RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 FAM8A1Q9UBU6 413 aa11.33□□□□□ -0.6
COPA-201ENST00000241704 ASTN2O75129 1339 aaPredicted RBP11.33□□□□□ -0.6
COPA-201ENST00000241704 TRPM3Q9HCF6 1732 aaPredicted RBP11.32□□□□□ -0.6
COPA-201ENST00000241704 CASTOR2A6NHX0 329 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 MAGEA4P43358 317 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
COPA-201ENST00000241704 HGSNATQ68CP4 663 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 LBX2Q6XYB7 198 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 CCT7Q99832 543 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 RAB6BQ9NRW1 208 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 ORC1Q13415 861 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 C16orf72Q14CZ0 275 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 SLC27A1Q6PCB7 646 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 PLPPR4Q7Z2D5 763 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 MRPL1Q9BYD6 325 aaKnown RBP11.32□□□□□ -0.6
COPA-201ENST00000241704 ZNF180Q9UJW8 692 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 E5RI56 91 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 MAFO75444 373 aaPredicted RBP11.32□□□□□ -0.6
COPA-201ENST00000241704 PGM3O95394 542 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 TAC1P20366 129 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 AVPR1AP37288 418 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 TREML2Q5T2D2 321 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 NT5DC4Q86YG4 428 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 MIB1Q86YT6 1006 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 MCOLN2Q8IZK6 566 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 OR6Y1Q8NGX8 325 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 ZNF398Q8TD17 642 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 VCPIP1Q96JH7 1222 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 MRPL9Q9BYD2 267 aaKnown RBP11.32□□□□□ -0.6
COPA-201ENST00000241704 TRPM5Q9NZQ8 1165 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 DOLKQ9UPQ8 538 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 FIS1Q9Y3D6 152 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 RIPK3Q9Y572 518 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 ASLP04424 464 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 APRTP07741 180 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 STX1BP61266 288 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 FRA10AC1Q70Z53 315 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 TAS2R42Q7RTR8 314 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 DNAAF5Q86Y56 855 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 WDR75Q8IWA0 830 aaKnown RBP11.32□□□□□ -0.6
COPA-201ENST00000241704 COPS5Q92905 334 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 FBXO32Q969P5 355 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 FAM118BQ9BPY3 351 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 PAK5Q9P286 719 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 BAG5Q9UL15 447 aa11.32□□□□□ -0.6
COPA-201ENST00000241704 GOLGA8QA0A0J9YX86 632 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 GOLGA8OA6NCC3 632 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 GOLGA8NF8WBI6 632 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 TGFB1I1O43294 461 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 EGFRP00533 1210 aa11.31□□□□□ -0.6
COPA-201ENST00000241704 GRK4P32298 578 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms