RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ZSWIM1Q9BR11 485 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 FBXO44Q9H4M3 255 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 TECPR2O15040 1411 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 CYP2A6P11509 494 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 CCR1P32246 355 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 MYL6P60660 151 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 GRB10Q13322 594 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 NOL9Q5SY16 702 aaKnown RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 GATAD2AQ86YP4 633 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 KCTD14Q9BQ13 255 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 SYT15Q9BQS2 421 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 PDGFDQ9GZP0 370 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 INTS13Q9NVM9 706 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 PPP2R3BQ9Y5P8 575 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 TARBP1Q13395 1621 aaKnown RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 MANSC4A6NHS7 340 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 DLGAP3O95886 979 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 ACAT1P24752 427 aaKnown RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 RAB27AP51159 221 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 FBXO47Q5MNV8 452 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 CCNI2Q6ZMN8 369 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 SENP6Q9GZR1 1112 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 PARNO95453 639 aaKnown RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 CYP11B1P15538 503 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 ADIGQ0VDE8 80 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 ELAVL2Q12926 359 aaKnown RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 DNAJC3Q13217 504 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 TCEA2Q15560 299 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 C11orf63Q6NUN7 778 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 LLGL2Q6P1M3 1020 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 CCDC103Q8IW40 242 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 GLMNQ92990 594 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 ACTR8Q9H981 624 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 RGS18Q9NS28 235 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 FOXN3O00409 490 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 TAL1P17542 331 aaPredicted RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 NFIL3Q16649 462 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 GFM2Q969S9 779 aaKnown RBP13.6□□□□□ -0.23
COL1A1-201ENST00000225964 TMEM159Q96B96 161 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 NACC2Q96BF6 587 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 TRIM8Q9BZR9 551 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 SPATC1LQ9H0A9 340 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 AHSPQ9NZD4 102 aa13.6□□□□□ -0.23
COL1A1-201ENST00000225964 PPP2R1BP30154 601 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 GRIK3Q13003 919 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 ERMARDQ5T6L9 678 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 ATAD3BQ5T9A4 648 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 USP49Q70CQ1 688 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 SLC47A2Q86VL8 602 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 LGI2Q8N0V4 545 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 CBWD1Q9BRT8 395 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 ATP6V1HQ9UI12 483 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 VANGL2Q9ULK5 521 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 DDNO94850 711 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 POLR2EP19388 210 aaKnown RBP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 CYP24A1Q07973 514 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 MMRN1Q13201 1228 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 RXFP2Q8WXD0 754 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 SYN2Q92777 582 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 CHURC1-FNTBB4DL54 471 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 SMIM22K7EJ46 135 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 EIF3HO15372 352 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 SMNDC1O75940 238 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 CLK2P49760 499 aaKnown RBP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 SEL1L3Q68CR1 1132 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 ILDR2Q71H61 639 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 GLT6D1Q7Z4J2 308 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 FAM9CQ8IZT9 166 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 CISHQ9NSE2 258 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 UXTQ9UBK9 157 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 MSRAQ9UJ68 235 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 RAD54BQ9Y620 910 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 H3BRB1 525 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 IGSF6O95976 241 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 GYPCP04921 128 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 TRAF2Q12933 501 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 POU6F1Q14863 301 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 SLC39A12Q504Y0 691 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 TLK2Q86UE8 772 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 MDM1Q8TC05 714 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 MTFMTQ96DP5 389 aaKnown RBP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 TPD52L3Q96J77 140 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 ZDHHC15Q96MV8 337 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 SERPINB12Q96P63 405 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 BBS4Q96RK4 519 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 CEP41Q9BYV8 373 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 MTFR1LQ9H019 292 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 TUT1Q9H6E5 874 aaKnown RBP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 ZDHHC6Q9H6R6 413 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 ATP13A1Q9HD20 1204 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 ARHGEF3Q9NR81 526 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 RBM22Q9NW64 420 aaKnown RBP eCLIP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 LTFP02788 710 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 CCT8P50990 548 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 MAP1SQ66K74 1059 aaPredicted RBP13.59□□□□□ -0.23
COL1A1-201ENST00000225964 NECAB2Q7Z6G3 386 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 OMDQ99983 421 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 TMEM121Q9BTD3 319 aa13.59□□□□□ -0.23
COL1A1-201ENST00000225964 RSPH9Q9H1X1 276 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms