RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 DENND1CQ8IV53 801 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 CPA5Q8WXQ8 436 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 GOLGA1Q92805 767 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 CD101Q93033 1021 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 OTUB2Q96DC9 234 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 TSPY26PQ9H489 355 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 SPATA6Q9NWH7 488 aaPredicted RBP13.25□□□□□ -0.29
LSM5-201ENST00000223084 DAAM1Q9Y4D1 1078 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 CEP83Q9Y592 693 aa13.25□□□□□ -0.29
LSM5-201ENST00000223084 ANTXRLA6NF34 631 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 SART1O43290 800 aaKnown RBP13.24□□□□□ -0.29
LSM5-201ENST00000223084 GRAP2O75791 330 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 ADH1CP00326 375 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 CDH5P33151 784 aaPredicted RBP13.24□□□□□ -0.29
LSM5-201ENST00000223084 RPS9P46781 194 aaKnown RBP13.24□□□□□ -0.29
LSM5-201ENST00000223084 NUBP1P53384 320 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 UBASH3AP57075 661 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 AMPD2Q01433 879 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 FMO1Q01740 532 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 MESP2Q0VG99 397 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 GRSF1Q12849 480 aaKnown RBP eCLIP13.24□□□□□ -0.29
LSM5-201ENST00000223084 MTAPQ13126 283 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 CCINQ13939 588 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 GAS6Q14393 721 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 ANGPT1Q15389 498 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 TRIP4Q15650 581 aaPredicted RBP13.24□□□□□ -0.29
LSM5-201ENST00000223084 ANO4Q32M45 955 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 NAA35Q5VZE5 725 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 LRSAM1Q6UWE0 723 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 TPGS1Q6ZTW0 290 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 C1orf210Q8IVY1 113 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 NAT16Q8N8M0 369 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 TMEM35BQ8NCS4 154 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 ADAM32Q8TC27 787 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 BAP1Q92560 729 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 EZH1Q92800 747 aaPredicted RBP13.24□□□□□ -0.29
LSM5-201ENST00000223084 BHMTQ93088 406 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 P2RY11Q96G91 374 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 NOX5Q96PH1 765 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 KCNH6Q9H252 994 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 CHRDQ9H2X0 955 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 SYNCQ9H7C4 482 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 SPHK2Q9NRA0 654 aa13.24□□□□□ -0.29
LSM5-201ENST00000223084 AGO1Q9UL18 857 aaKnown RBP13.24□□□□□ -0.29
LSM5-201ENST00000223084 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
LSM5-201ENST00000223084 NEDD8-MDP1E9PL57 170 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 CAPN9O14815 690 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 YWHAZP63104 245 aaKnown RBP13.23□□□□□ -0.29
LSM5-201ENST00000223084 NOMO3P69849 1222 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 PITX1P78337 314 aaPredicted RBP13.23□□□□□ -0.29
LSM5-201ENST00000223084 CDR2Q01850 454 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 GAD2Q05329 585 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 LRRC32Q14392 662 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 DGKKQ5KSL6 1271 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 PKN3Q6P5Z2 889 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 OLFML1Q6UWY5 402 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 TAC4Q86UU9 113 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 ERICH1Q86X53 443 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 SFTPA1Q8IWL2 248 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 MAML2Q8IZL2 1156 aaPredicted RBP13.23□□□□□ -0.29
LSM5-201ENST00000223084 RNF214Q8ND24 703 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 DQX1Q8TE96 717 aaKnown RBP13.23□□□□□ -0.29
LSM5-201ENST00000223084 IPO4Q8TEX9 1081 aaKnown RBP13.23□□□□□ -0.29
LSM5-201ENST00000223084 PLD4Q96BZ4 506 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 PCDHB18PQ96TA0 734 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 PRRX2Q99811 253 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 DCLK3Q9C098 648 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 C2orf42Q9NWW7 574 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 PLK2Q9NYY3 685 aa13.23□□□□□ -0.29
LSM5-201ENST00000223084 HBS1LQ9Y450 684 aaKnown RBP13.23□□□□□ -0.29
LSM5-201ENST00000223084 A0A1W2PQC6 194 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 TRIM24O15164 1050 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 HOXC11O43248 304 aaPredicted RBP13.22□□□□□ -0.29
LSM5-201ENST00000223084 LSM8O95777 96 aaKnown RBP13.22□□□□□ -0.29
LSM5-201ENST00000223084 CYP1A1P04798 512 aaPredicted RBP13.22□□□□□ -0.29
LSM5-201ENST00000223084 MAGEA9P43362 315 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 PTPN5P54829 565 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 TBX4P57082 545 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 SLC6A3Q01959 620 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 KDSRQ06136 332 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 PHLDB2Q86SQ0 1253 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 ZNF677Q86XU0 584 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 ETFBKMTQ8IXQ9 262 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 DEFB106AQ8N104 65 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 SLC30A5Q8TAD4 765 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 FCRL2Q96LA5 508 aaPredicted RBP13.22□□□□□ -0.29
LSM5-201ENST00000223084 SLC2A13Q96QE2 648 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 BBS2Q9BXC9 721 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 POPDC2Q9HBU9 364 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 FAM86C1Q9NVL1 165 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 POLR3BQ9NW08 1133 aaPredicted RBP13.22□□□□□ -0.29
LSM5-201ENST00000223084 IFNKQ9P0W0 207 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 ZNF510Q9Y2H8 683 aa13.22□□□□□ -0.29
LSM5-201ENST00000223084 GOLGA6L7A0A1B0GV03 622 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 LRRC53A6NM62 1247 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 LAMTOR5O43504 91 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 HSF2BPO75031 334 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 RNF40O75150 1001 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 TULP3O75386 442 aa13.21□□□□□ -0.29
LSM5-201ENST00000223084 IGLV3-27P01718 113 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms