RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 NOTCH4Q99466 2003 aa12.79□□□□□ -0.36
SNU13-201ENST00000215956 GABRDO14764 452 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 PHF2O75151 1096 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 RNF8O76064 485 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 ZRANB2O95218 330 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNU13-201ENST00000215956 ERBB2P04626 1255 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 GBP1P32455 592 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 MAGEA9P43362 315 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
SNU13-201ENST00000215956 GPS2Q13227 327 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 ORC1Q13415 861 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 USP41Q3LFD5 358 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 PKDCCQ504Y2 493 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 PPP1R26Q5T8A7 1209 aaPredicted RBP12.78□□□□□ -0.36
SNU13-201ENST00000215956 DCAF12L1Q5VU92 463 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 FUT10Q6P4F1 479 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 MTSS1LQ765P7 747 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 POLNQ7Z5Q5 900 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 GRASPQ7Z6J2 395 aaPredicted RBP12.78□□□□□ -0.36
SNU13-201ENST00000215956 SLC13A5Q86YT5 568 aaPredicted RBP12.78□□□□□ -0.36
SNU13-201ENST00000215956 GPR65Q8IYL9 337 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 ZBTB44Q8NCP5 570 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 GSTCDQ8NEC7 633 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 CPXM1Q96SM3 734 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 PNKPQ96T60 521 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 COLEC11Q9BWP8 271 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 OSBPL6Q9BZF3 934 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 GPR62Q9BZJ7 368 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 GOLGA2P5Q9HBQ8 144 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 ST7Q9NRC1 585 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 ZSCAN32Q9NX65 697 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 SMARCAL1Q9NZC9 954 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 FEZ2Q9UHY8 353 aaPredicted RBP12.78□□□□□ -0.36
SNU13-201ENST00000215956 CDH9Q9ULB4 789 aa12.78□□□□□ -0.36
SNU13-201ENST00000215956 MYH10P35580 1976 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 FAM170AA1A519 330 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 FAM170BA6NMN3 283 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 GOLGA8SH3BPF8 625 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 RPL17P18621 184 aaKnown RBP12.77□□□□□ -0.36
SNU13-201ENST00000215956 FNTAP49354 379 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 VSNL1P62760 191 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 CREMQ03060 361 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 CUL1Q13616 776 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 MAPRE1Q15691 268 aaKnown RBP12.77□□□□□ -0.36
SNU13-201ENST00000215956 UPP1Q16831 310 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 SLC44A4Q53GD3 710 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 C2CD6Q53TS8 623 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 ZFYVE27Q5T4F4 411 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 FAM102AQ5T9C2 384 aaPredicted RBP12.77□□□□□ -0.36
SNU13-201ENST00000215956 CYP4A22Q5TCH4 519 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 OR6B2Q6IFH4 312 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 ARCQ7LC44 396 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 HDXQ7Z353 690 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 PHLDB2Q86SQ0 1253 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 TMEM110Q86TL2 294 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 KLHL7Q8IXQ5 586 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 THEM5Q8N1Q8 247 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 B3GALNT2Q8NCR0 500 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 UBA3Q8TBC4 463 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 HNRNPABQ99729 332 aaKnown RBP12.77□□□□□ -0.36
SNU13-201ENST00000215956 RTKNQ9BST9 563 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 LTB4R2Q9NPC1 389 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 MIOSQ9NXC5 875 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 USP18Q9UMW8 372 aa12.77□□□□□ -0.36
SNU13-201ENST00000215956 UTP11Q9Y3A2 253 aaKnown RBP12.77□□□□□ -0.36
SNU13-201ENST00000215956 RALGAPA1Q6GYQ0 2036 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 F5P12259 2224 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 VWA8A3KMH1 1905 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 XPO1O14980 1071 aaKnown RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 SART1O43290 800 aaKnown RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 LILRB5O75023 590 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 HEXIM1O94992 359 aaKnown RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 CYP11A1P05108 521 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 PDGFRBP09619 1106 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 PYGMP11217 842 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 PTPN1P18031 435 aaKnown RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 GPD1P21695 349 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 CLCNKBP51801 687 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 RPL7AP62424 266 aaKnown RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 NTHL1P78549 312 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 PFKPQ01813 784 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 ZNF211Q13398 564 aaPredicted RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 CYP1B1Q16678 543 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 ST3GAL2Q16842 350 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 EMBQ6PCB8 327 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 RSPO2Q6UXX9 243 aaPredicted RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 CCNI2Q6ZMN8 369 aaPredicted RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 CCDC50Q8IVM0 306 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 SLC35F5Q8WV83 523 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 NELL1Q92832 810 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 FGF13Q92913 245 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 AP1M1Q9BXS5 423 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 DDX43Q9NXZ2 648 aaKnown RBP12.77□□□□□ -0.37
SNU13-201ENST00000215956 FBXW11Q9UKB1 542 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 ADAM28Q9UKQ2 775 aa12.77□□□□□ -0.37
SNU13-201ENST00000215956 CNOT1A5YKK6 2376 aaKnown RBP12.76□□□□□ -0.37
SNU13-201ENST00000215956 DCDC2BA2VCK2 349 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms