RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 GLRBP48167 497 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 CDK7P50613 346 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 NFIL3Q16649 462 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 DDR2Q16832 855 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 CYP4A22Q5TCH4 519 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 LLGL2Q6P1M3 1020 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 XRRA1Q6P2D8 792 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 C11orf88Q6PI97 169 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 SAPCD2Q86UD0 394 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 CAMK1DQ8IU85 385 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 MICALL2Q8IY33 904 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 APPL2Q8NEU8 664 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 SENP2Q9HC62 589 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 PNPLA3Q9NST1 481 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 PCDHB8Q9UN66 801 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 PIN4Q9Y237 131 aaKnown RBP10.73□□□□□ -0.69
VCL-201ENST00000211998 CCDC182A6NF36 153 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 UBDO15205 165 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 MAP3K13O43283 966 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 SERPINE1P05121 402 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 VPS72Q15906 364 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 ZSWIM7Q19AV6 140 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 BROXQ5VW32 411 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 SRPK1Q96SB4 655 aaKnown RBP10.73□□□□□ -0.69
VCL-201ENST00000211998 PARK7Q99497 189 aaKnown RBP10.73□□□□□ -0.69
VCL-201ENST00000211998 SPON2Q9BUD6 331 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 MTIF3Q9H2K0 278 aaKnown RBP10.73□□□□□ -0.69
VCL-201ENST00000211998 SERHL2Q9H4I8 314 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 SERHLQ9NQF3 203 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 UMODL1Q5DID0 1318 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 FAM237BA0A1B0GVD1 139 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 IL18RAPO95256 599 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 SLC25A27O95847 323 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 CCNG2Q16589 344 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 FAM83EQ2M2I3 478 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 IL31Q6EBC2 164 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 C4orf22Q6V702 233 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 C16orf86Q6ZW13 317 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 C11orf74Q86VG3 221 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 MIER2Q8N344 545 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 CCDC33Q8N5R6 958 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 UXS1Q8NBZ7 420 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 PHACTR1Q9C0D0 580 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 KRT84Q9NSB2 600 aa10.73□□□□□ -0.69
VCL-201ENST00000211998 FAM95CA0A1B0GW59 222 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 CCNKO75909 580 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 TPI1P60174 286 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 XIAPP98170 497 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 SNAPC2Q13487 334 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 SCARF1Q14162 830 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 SNX17Q15036 470 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 CYP51A1Q16850 503 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 CNPY1Q3B7I2 92 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 FAM98BQ52LJ0 330 aaKnown RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 ZC2HC1CQ53FD0 456 aaPredicted RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 OTOAQ7RTW8 1153 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 B3GALT6Q96L58 329 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 MED15Q96RN5 788 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 TMEM121Q9BTD3 319 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 OSBPL6Q9BZF3 934 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 CD274Q9NZQ7 290 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 COQ6Q9Y2Z9 468 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 AK9Q5TCS8 1911 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 EFCAB10A6NFE3 127 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 HS6ST1O60243 411 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 RGS20O76081 388 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 NDUFB10O96000 172 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 KRT20P35900 424 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 VAC14Q08AM6 782 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ZNF284Q2VY69 593 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 TINF2Q9BSI4 451 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 WDR12Q9GZL7 423 aaKnown RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 CLK4Q9HAZ1 481 aaKnown RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 CDC42BPAQ5VT25 1732 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 KLHL33A6NCF5 533 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 PRLP01236 227 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 CD4P01730 458 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 NELFEP18615 380 aaKnown RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 PTGS2P35354 604 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 CCT8P50990 548 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 N4BP2L1Q5TBK1 243 aaPredicted RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 LPCAT4Q643R3 524 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 PPP4R4Q6NUP7 873 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 AAGABQ6PD74 315 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ZCCHC23Q6ZST2 131 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 C16orf62Q7Z3J2 963 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ULK2Q8IYT8 1036 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ZBTB8BQ8NAP8 495 aaPredicted RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 VPS33AQ96AX1 596 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 SEMA6BQ9H3T3 888 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ELP3Q9H9T3 547 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 COMMD8Q9NX08 183 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 LSM7Q9UK45 103 aaKnown RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 SPATA31A6Q5VVP1 1343 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 TRIM64CA6NLI5 447 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ATG7O95352 703 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 SGPL1O95470 568 aa10.72□□□□□ -0.69
VCL-201ENST00000211998 ATF4P18848 351 aaPredicted RBP10.72□□□□□ -0.69
VCL-201ENST00000211998 CNTFP26441 200 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms