RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 CCND2P30279 289 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 POLR2BP30876 1174 aaKnown RBP17.32■□□□□ 0.36
CTDP1-201ENST00000075430 MLH1P40692 756 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 CDK7P50613 346 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 FOLH1Q04609 750 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 PDCD2Q16342 344 aaPredicted RBP17.32■□□□□ 0.36
CTDP1-201ENST00000075430 AMHR2Q16671 573 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 SPDYAQ5MJ70 313 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 C10orf107Q8IVU9 208 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 C12orf29Q8N999 325 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 TMA16Q96EY4 203 aaKnown RBP17.32■□□□□ 0.36
CTDP1-201ENST00000075430 TRAPPC9Q96Q05 1148 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 PXMP2Q9NR77 195 aa17.32■□□□□ 0.36
CTDP1-201ENST00000075430 PSAPP07602 524 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 TYK2P29597 1187 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 GLRBP48167 497 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 SLC1A6P48664 564 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 INHBCP55103 352 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 DYNC1I2Q13409 638 aaKnown RBP17.31■□□□□ 0.36
CTDP1-201ENST00000075430 DNAL1Q4LDG9 190 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 RXFP2Q8WXD0 754 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 DMAP1Q9NPF5 467 aaPredicted RBP17.31■□□□□ 0.36
CTDP1-201ENST00000075430 DTNAQ9Y4J8 743 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 A0A088AWK7 358 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 A8MXQ7 604 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 FOXD2O60548 495 aaPredicted RBP17.31■□□□□ 0.36
CTDP1-201ENST00000075430 GARTP22102 1010 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 TBXAS1P24557 533 aaPredicted RBP17.31■□□□□ 0.36
CTDP1-201ENST00000075430 PPM1LQ5SGD2 360 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 C6orf52Q5T4I8 152 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 UNC5AQ6ZN44 842 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 RELL1Q8IUW5 271 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 TMEM192Q8IY95 271 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 TWNKQ96RR1 684 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 KCNK4Q9NYG8 393 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 LMCD1Q9NZU5 365 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 HACL1Q9UJ83 578 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 TDRKHQ9Y2W6 561 aaKnown RBP17.31■□□□□ 0.36
CTDP1-201ENST00000075430 CNTNAP1P78357 1384 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 A0A1B0GTW7 788 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 CA9Q16790 459 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 TBC1D25Q3MII6 688 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 BBS12Q6ZW61 710 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 NET1Q7Z628 596 aaPredicted RBP17.31■□□□□ 0.36
CTDP1-201ENST00000075430 SULF1Q8IWU6 871 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 ZNF398Q8TD17 642 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 PPP1R13LQ8WUF5 828 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 PEBP4Q96S96 227 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 LPIN3Q9BQK8 851 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 ANKEF1Q9NU02 776 aa17.31■□□□□ 0.36
CTDP1-201ENST00000075430 ERVK-10P10266 1014 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 TTLL12Q14166 644 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-201ENST00000075430 PDPK2PQ6A1A2 396 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 LAYNQ6UX15 382 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 FRMD7Q6ZUT3 714 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 NCAPG2Q86XI2 1143 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 NAT14Q8WUY8 206 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 FBXL18Q96ME1 805 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 CAB39LQ9H9S4 337 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 CDK5RAP2Q96SN8 1893 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 C15orf38-AP3S2A0A0A6YYH1 394 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 TPP1O14773 563 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 HSPA4LO95757 839 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 CLPTM1O96005 669 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 FAM200BP0CF97 657 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 PTGER2P43116 358 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 GMPSP49915 693 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-201ENST00000075430 TNFAIP1Q13829 316 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 ARPINQ7Z6K5 226 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 TTC13Q8NBP0 860 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 B3GNT5Q9BYG0 378 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 TAF1LQ8IZX4 1826 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 SIN3BO75182 1162 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 SEC24DO94855 1032 aaPredicted RBP17.3■□□□□ 0.36
CTDP1-201ENST00000075430 METTL18O95568 372 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 PRAMEP78395 509 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 CNTN2Q02246 1040 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 DLG2Q15700 870 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 FAM219BQ5XKK7 198 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 SCUBE3Q8IX30 993 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 SPATA6LQ8N4H0 392 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 DCLK2Q8N568 766 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 LRGUKQ96M69 825 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 NIF3L1Q9GZT8 377 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 KLC2Q9H0B6 622 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 C17orf75Q9HAS0 396 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 BTBD7Q9P203 1132 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 MFHAS1Q9Y4C4 1052 aa17.3■□□□□ 0.36
CTDP1-201ENST00000075430 B4GALT5O43286 388 aa17.29■□□□□ 0.36
CTDP1-201ENST00000075430 HNRNPCP07910 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
CTDP1-201ENST00000075430 MAPK10P53779 464 aa17.29■□□□□ 0.36
CTDP1-201ENST00000075430 NME8Q8N427 588 aa17.29■□□□□ 0.36
CTDP1-201ENST00000075430 SGF29Q96ES7 293 aa17.29■□□□□ 0.36
CTDP1-201ENST00000075430 PSAT1Q9Y617 370 aa17.29■□□□□ 0.36
CTDP1-201ENST00000075430 RFPL1O75677 317 aa17.29■□□□□ 0.36
CTDP1-201ENST00000075430 CXCL8P10145 99 aa17.29■□□□□ 0.36
CTDP1-201ENST00000075430 GBE1Q04446 702 aa17.29■□□□□ 0.36
CTDP1-201ENST00000075430 KRT72Q14CN4 511 aa17.29■□□□□ 0.36
CTDP1-201ENST00000075430 DUOXA2Q1HG44 320 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms