RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 MSL3P1P0C860 447 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 FAM228BP0C875 321 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 TRIM49P0CI25 452 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 TRIM49CP0CI26 452 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 THRAP10827 490 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 KNOP1Q1ED39 458 aaKnown RBP10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 SHROOM1Q2M3G4 852 aaPredicted RBP10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 ZNF746Q6NUN9 644 aaPredicted RBP10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 WDR59Q6PJI9 974 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 CHSY1Q86X52 802 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 CCDC60Q8IWA6 550 aaPredicted RBP10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 TSPAN18Q96SJ8 248 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 TMEM47Q9BQJ4 181 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 RAB26Q9ULW5 256 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 EVPLLA8MZ36 301 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 MBL2P11226 248 aaPredicted RBP10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 RAB14P61106 215 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 TXNRD1Q16881 649 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 CDH24Q86UP0 819 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 ENDOVQ8N8Q3 282 aaKnown RBP10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 SEPT1Q8WYJ6 367 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 TUBGCP3Q96CW5 907 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 TMA16Q96EY4 203 aaKnown RBP10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 AGXT2Q9BYV1 514 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 SENP2Q9HC62 589 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 ANKARQ7Z5J8 1434 aa10.14□□□□□ -0.79
SPTAN1-228ENST00000635853 TRIM64CA6NLI5 447 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 BTNL10A8MVZ5 291 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 F8W810 466 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 VWA5AO00534 786 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 ANXA11P50995 505 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 RPS7P62081 194 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 STILQ15468 1287 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 SMYD1Q8NB12 490 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 AHCYL2Q96HN2 611 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 SLITRK1Q96PX8 696 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 EIF2AK1Q9BQI3 630 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 OXCT2Q9BYC2 517 aaPredicted RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 PLK2Q9NYY3 685 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 UVRAGQ9P2Y5 699 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 RABL2BQ9UNT1 228 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 RBMX2Q9Y388 322 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 HEG1Q9ULI3 1381 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 H3BNX3 289 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 TNNI3P19429 210 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 CHRM3P20309 590 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 NUP62P37198 522 aaPredicted RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 NUDT2P50583 147 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 ANTXR2P58335 489 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 CAMK2GQ13555 558 aaPredicted RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 SCARF1Q14162 830 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 POLD3Q15054 466 aaPredicted RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 POTEGQ6S5H5 508 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 ECHDC2Q86YB7 292 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 CLEC4FQ8N1N0 589 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 FBXL16Q8N461 479 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 AGBL1Q96MI9 1066 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 PURBQ96QR8 312 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 TRIM8Q9BZR9 551 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 PRDM16Q9HAZ2 1276 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 ALG6Q9Y672 507 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 SQORQ9Y6N5 450 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 TET3O43151 1660 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 PP2D1A8MPX8 630 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 PGK2P07205 417 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 HIRAP54198 1017 aaPredicted RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 AQP5P55064 265 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 USP10Q14694 798 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 DGKDQ16760 1214 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 CAMKK1Q8N5S9 505 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 KCNK4Q9NYG8 393 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 HSPBP1Q9NZL4 362 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 NAGPAQ9UK23 515 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 USP20Q9Y2K6 914 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 COL15A1P39059 1388 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 SERPINB9P50453 376 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 ALX1Q15699 326 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 DGUOKQ16854 277 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 EMC10Q5UCC4 262 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 KLHDC10Q6PID8 442 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 RNF19BQ6ZMZ0 732 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 EXOC3L1Q86VI1 746 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 CLYBLQ8N0X4 340 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 VPS37AQ8NEZ2 397 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 ST13P5Q8NFI4 369 aaPredicted RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 TMEM169Q96HH4 297 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 FAM111AQ96PZ2 611 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 EVA1BQ9NVM1 165 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 RABL2AQ9UBK7 228 aaPredicted RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 PNMA8BQ9ULN7 279 aaPredicted RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 ATP7AQ04656 1500 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 CRB1P82279 1406 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 POLRMTO00411 1230 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 PHGDHO43175 533 aaKnown RBP10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 USP1O94782 785 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 RHOBTB1O94844 696 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 CYP11B2P19099 503 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 COMTP21964 271 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 FECHP22830 423 aa10.13□□□□□ -0.79
SPTAN1-228ENST00000635853 WDR72Q3MJ13 1102 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms