RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 PLEKHG4Q58EX7 1191 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 VSIG1Q86XK7 387 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 CCDC185Q8N715 623 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 PPM1NQ8N819 430 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 ANKRD52Q8NB46 1076 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 SLC2A14Q8TDB8 520 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 TBC1D31Q96DN5 1066 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 KLC2Q9H0B6 622 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 PLAC1Q9HBJ0 212 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 NPHS2Q9NP85 383 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 MTMR10Q9NXD2 777 aa12.43□□□□□ -0.42
TP53-227ENST00000622645 ZC3H7BQ9UGR2 993 aaKnown RBP12.43□□□□□ -0.42
TP53-227ENST00000622645 A6NJR5 290 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 PIRO00625 290 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 UNC5CO95185 931 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 C1QAP02745 245 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 PYGBP11216 843 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 DESP17661 470 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 SOX4Q06945 474 aaPredicted RBP12.42□□□□□ -0.42
TP53-227ENST00000622645 CCDC15Q0P6D6 951 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 BST2Q10589 180 aaKnown RBP12.42□□□□□ -0.42
TP53-227ENST00000622645 SETDB1Q15047 1291 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 SLC26A9Q7LBE3 791 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 APBB1IPQ7Z5R6 666 aaPredicted RBP12.42□□□□□ -0.42
TP53-227ENST00000622645 ZDHHC17Q8IUH5 632 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 PYROXD2Q8N2H3 581 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 NETO2Q8NC67 525 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 C10orf82Q8WW14 230 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 USP6NLQ92738 828 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 ALKBH8Q96BT7 664 aaKnown RBP12.42□□□□□ -0.42
TP53-227ENST00000622645 C11orf84Q9BUA3 381 aaPredicted RBP12.42□□□□□ -0.42
TP53-227ENST00000622645 POPDC2Q9HBU9 364 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 SLC5A4Q9NY91 659 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 UBQLN1Q9UMX0 589 aaKnown RBP12.42□□□□□ -0.42
TP53-227ENST00000622645 AP4E1Q9UPM8 1137 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 MFHAS1Q9Y4C4 1052 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 NRCAMQ92823 1304 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 DNAH12Q6ZR08 3092 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 CFAP69A5D8W1 941 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 TM9SF1O15321 606 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 CCNB1P14635 433 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 GRIA1P42261 906 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 PTPN9P43378 593 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 BCAT1P54687 386 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 SNX16P57768 344 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 DPYSL2Q16555 572 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 KCNT2Q6UVM3 1135 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 SH2D5Q6ZV89 423 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 PLEKHH3Q7Z736 793 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 CRYBG2Q8N1P7 616 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 CENPIQ92674 756 aaPredicted RBP12.42□□□□□ -0.42
TP53-227ENST00000622645 FAM111AQ96PZ2 611 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 PTPN18Q99952 460 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 CYLDQ9NQC7 956 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 DCTN4Q9UJW0 460 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 TTLL3Q9Y4R7 772 aa12.42□□□□□ -0.42
TP53-227ENST00000622645 F5H423 210 aaPredicted RBP12.41□□□□□ -0.42
TP53-227ENST00000622645 F2P00734 622 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 AMPD1P23109 780 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 TARSP26639 723 aaKnown RBP12.41□□□□□ -0.42
TP53-227ENST00000622645 TKTP29401 623 aaKnown RBP12.41□□□□□ -0.42
TP53-227ENST00000622645 CCDC91Q7Z6B0 441 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 LRRC6Q86X45 466 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 FAM131BQ86XD5 332 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 CSPG4P5Q96PW8 444 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 TMEM237Q96Q45 408 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 KCTD15Q96SI1 283 aaPredicted RBP12.41□□□□□ -0.42
TP53-227ENST00000622645 VPS11Q9H270 941 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 SNX25Q9H3E2 840 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 MANSC1Q9H8J5 431 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 SMYD2Q9NRG4 433 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 SLC45A1Q9Y2W3 748 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 MBLAC1A4D2B0 266 aaPredicted RBP12.41□□□□□ -0.42
TP53-227ENST00000622645 SLC15A5A6NIM6 579 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 TREHO43280 583 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 UGT1A9O60656 530 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 GOT1P17174 413 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 IGFBP6P24592 240 aaPredicted RBP12.41□□□□□ -0.42
TP53-227ENST00000622645 ALDH3A1P30838 453 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 SNX17Q15036 470 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 CDHR3Q6ZTQ4 885 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 ZNF534Q76KX8 674 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 ANKRD23Q86SG2 305 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 SLC26A11Q86WA9 606 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 MPP5Q8N3R9 675 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 TTC17Q96AE7 1141 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 UGT1A7Q9HAW7 530 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 UGT1A10Q9HAW8 530 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 UGT1A8Q9HAW9 530 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 TMPRSS4Q9NRS4 437 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 HAO1Q9UJM8 370 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.41□□□□□ -0.42
TP53-227ENST00000622645 MAD1L1Q9Y6D9 718 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 NUMBLQ9Y6R0 609 aa12.41□□□□□ -0.42
TP53-227ENST00000622645 SMIM35A0A1B0GVV1 85 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 GLTPD2A6NH11 291 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 TRIM49D1C9J1S8 452 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 SPAG6O75602 509 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 ETV4P43268 484 aa12.4□□□□□ -0.42
TP53-227ENST00000622645 PITX1P78337 314 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms