RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 MRRFQ96E11 262 aaKnown RBP22.12■■□□□ 1.13
LIME1-210ENST00000621325 KCTD15Q96SI1 283 aaPredicted RBP22.12■■□□□ 1.13
LIME1-210ENST00000621325 MLXIPLQ9NP71 852 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 TMPRSS4Q9NRS4 437 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 KRT82Q9NSB4 513 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 TMEM30AQ9NV96 361 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 FAM169AQ9Y6X4 670 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 MYBPHLA2RUH7 354 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 PIAS1O75925 651 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 TGM2P21980 687 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 MATKP42679 507 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 GBE1Q04446 702 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 DCAF6Q58WW2 860 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 OTUD1Q5VV17 481 aaPredicted RBP22.12■■□□□ 1.13
LIME1-210ENST00000621325 SRRM1Q8IYB3 904 aaKnown RBP22.12■■□□□ 1.13
LIME1-210ENST00000621325 ZNF317Q96PQ6 595 aaPredicted RBP22.12■■□□□ 1.13
LIME1-210ENST00000621325 DNAI2Q9GZS0 605 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 MFHAS1Q9Y4C4 1052 aa22.12■■□□□ 1.13
LIME1-210ENST00000621325 TMEM88BA6NKF7 163 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 GPR182O15218 404 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 DRD4P21917 467 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 SSTR1P30872 391 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 CACNA2D1P54289 1103 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 ARL4CP56559 192 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 SLC10A2Q12908 348 aaPredicted RBP22.11■■□□□ 1.13
LIME1-210ENST00000621325 PAN2Q504Q3 1202 aaKnown RBP22.11■■□□□ 1.13
LIME1-210ENST00000621325 EFHC1Q5JVL4 640 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 HFE2Q6ZVN8 426 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 MAML1Q92585 1016 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 KCNK9Q9NPC2 374 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 RNF186Q9NXI6 227 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 SYNJ2BP-COX16A0A087WUM0 186 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 POMCP01189 267 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 BRAFP15056 766 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 ATP5DP30049 168 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 SULT1E1P49888 294 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 NKX3-2P78367 333 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 MRPS5P82675 430 aaKnown RBP22.11■■□□□ 1.13
LIME1-210ENST00000621325 BBS9Q3SYG4 887 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 FBXW10Q5XX13 1052 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 CCSAPQ6IQ19 270 aaPredicted RBP22.11■■□□□ 1.13
LIME1-210ENST00000621325 DSTYKQ6XUX3 929 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 HOMEZQ8IX15 550 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 HACE1Q8IYU2 909 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 ANKRD42Q8N9B4 389 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 CHMP6Q96FZ7 201 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 KCNK16Q96T55 309 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 SYT15Q9BQS2 421 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 TRMT13Q9NUP7 481 aaKnown RBP22.11■■□□□ 1.13
LIME1-210ENST00000621325 COX16Q9P0S2 106 aa22.11■■□□□ 1.13
LIME1-210ENST00000621325 DDX20Q9UHI6 824 aaKnown RBP22.11■■□□□ 1.13
LIME1-210ENST00000621325 NDC80O14777 642 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 SLC8A3P57103 927 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 FAXCQ5TGI0 409 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 SYPL2Q5VXT5 272 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 CTU1Q7Z7A3 348 aaKnown RBP22.1■■□□□ 1.13
LIME1-210ENST00000621325 KLHDC9Q8NEP7 349 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 PYROXD1Q8WU10 500 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 PCED1BQ96HM7 432 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 CSPG4P5Q96PW8 444 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 LRRC4Q9HBW1 653 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 ETNK2Q9NVF9 386 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 GIT1Q9Y2X7 761 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 LIG3P49916 1009 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 YWHAZP63104 245 aaKnown RBP22.1■■□□□ 1.13
LIME1-210ENST00000621325 EFTUD2Q15029 972 aaKnown RBP eCLIP22.1■■□□□ 1.133e-6■■■■□ 26.3
LIME1-210ENST00000621325 SLC25A52Q3SY17 297 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 TIGD5Q53EQ6 642 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 IGDCC3Q8IVU1 814 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 FBXO36Q8NEA4 188 aa22.1■■□□□ 1.13
LIME1-210ENST00000621325 ZMYND8Q9ULU4 1186 aaPredicted RBP22.1■■□□□ 1.13
LIME1-210ENST00000621325 E7ESA3 106 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 NRP1O14786 923 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 ZBED1O96006 694 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 TKTL1P51854 596 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 KCNJ11Q14654 390 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 LPIN1Q14693 890 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 UPP1Q16831 310 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 STRADAQ7RTN6 431 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 GPRIN1Q7Z2K8 1008 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 MRPL10Q7Z7H8 261 aaKnown RBP22.09■■□□□ 1.13
LIME1-210ENST00000621325 SMOQ99835 787 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 RHOBTB2Q9BYZ6 727 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 RAB6BQ9NRW1 208 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 FAM200BP0CF97 657 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 GOT1P17174 413 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 AMPD1P23109 780 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 SF3A3Q12874 501 aaKnown RBP eCLIP22.09■■□□□ 1.13
LIME1-210ENST00000621325 C11orf91Q3C1V1 193 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 CPLX4Q7Z7G2 160 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 VSIG1Q86XK7 387 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 SIX6OS1Q8N1H7 587 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 KCTD13Q8WZ19 329 aa22.09■■□□□ 1.13
LIME1-210ENST00000621325 C5orf60A6NFR6 353 aa22.08■■□□□ 1.13
LIME1-210ENST00000621325 RASA4BC9J798 803 aa22.08■■□□□ 1.13
LIME1-210ENST00000621325 RASA4O43374 803 aa22.08■■□□□ 1.13
LIME1-210ENST00000621325 AOC2O75106 756 aa22.08■■□□□ 1.13
LIME1-210ENST00000621325 AVILO75366 819 aa22.08■■□□□ 1.13
LIME1-210ENST00000621325 DAB1O75553 588 aa22.08■■□□□ 1.13
LIME1-210ENST00000621325 FAM35AQ86V20 835 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms