RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 SLC9A9Q8IVB4 645 aa14.69□□□□□ -0.06
PCDHB16-201ENST00000609684 FAM71AQ8IYT1 594 aa14.69□□□□□ -0.06
PCDHB16-201ENST00000609684 TEX9Q8N6V9 391 aa14.69□□□□□ -0.06
PCDHB16-201ENST00000609684 TRIM45Q9H8W5 580 aaPredicted RBP14.69□□□□□ -0.06
PCDHB16-201ENST00000609684 NT5MQ9NPB1 228 aa14.69□□□□□ -0.06
PCDHB16-201ENST00000609684 HMGCRP04035 888 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 LGALS2P05162 132 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 OVOS1Q6IE37 1185 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 TAGAPQ8N103 731 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 DEFB106AQ8N104 65 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 HTR3CQ8WXA8 447 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 TEX12Q9BXU0 123 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 V9GYQ6 96 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 SLIT3O75094 1523 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 H7C4K7 107 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 KRT16P08779 473 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 UBTFL6P0CB48 400 aaPredicted RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 SLC6A3Q01959 620 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 RASA2Q15283 850 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 NFE2Q16621 373 aaPredicted RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 TLK2Q86UE8 772 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 ZNF410Q86VK4 478 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 PCSK9Q8NBP7 692 aaKnown RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 ADAM32Q8TC27 787 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 TCP10LQ8TDR4 215 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 CYGBQ8WWM9 190 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 DACH2Q96NX9 599 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 C10orf88Q9H8K7 445 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 RBM22Q9NW64 420 aaKnown RBP eCLIP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 CHCHD3Q9NX63 227 aaKnown RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 ZSCAN9O15535 394 aaPredicted RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 HSPA1AP0DMV8 641 aaKnown RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 HSPA1BP0DMV9 641 aaKnown RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 MFSD10Q14728 455 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 PKN2Q16513 984 aaKnown RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 CRY2Q49AN0 593 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 SEL1L3Q68CR1 1132 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 GRAMD4Q6IC98 578 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 RRM2BQ7LG56 351 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 COPS5Q92905 334 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 PGM2Q96G03 612 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 ZCWPW1Q9H0M4 648 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 DISP2A7MBM2 1401 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 ANKRD26Q9UPS8 1709 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 H2AFYO75367 372 aaKnown RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 ASS1P00966 412 aaKnown RBP14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 ZSCAN5DPP0CG00 497 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 GRK2P25098 689 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 OXCT1P55809 520 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 IRF2BP1Q8IU81 584 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 CCDC126Q96EE4 140 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 RNF112Q9ULX5 631 aa14.68□□□□□ -0.06
PCDHB16-201ENST00000609684 APOC4-APOC2K7ER74 178 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 RNF225M0QZC1 329 aaPredicted RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 KCNK1O00180 336 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 TGFB1I1O43294 461 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 ENDOD1O94919 500 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 APOC2P02655 101 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 HNRNPH3P31942 346 aaKnown RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 DYNC1I2Q13409 638 aaKnown RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 POU6F1Q14863 301 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 NBPF20Q3BBV1 942 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 NT5DC4Q86YG4 428 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 RIOX2Q8IUF8 465 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 SHC3Q92529 594 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 WWOXQ9NZC7 414 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 MROH7Q68CQ1 1323 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 STK25O00506 426 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 THRAP10827 490 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 TPH1P17752 444 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 PPP3CCP48454 512 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 HDAC4P56524 1084 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 MAMLD1Q13495 774 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 SHROOM1Q2M3G4 852 aaPredicted RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 ARSHQ5FYA8 562 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 ZNF280DQ6N043 979 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 RXFP1Q9HBX9 757 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 DRG1Q9Y295 367 aaKnown RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 C3P01024 1663 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 NCF1BA6NI72 391 aaPredicted RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 SPDYE5A6NIY4 337 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 NCF1CA8MVU1 366 aaPredicted RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 E9PBE3 544 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 KLHL41O60662 606 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 FKBP9O95302 570 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 LRG1P02750 347 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 MBL2P11226 248 aaPredicted RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 NCF1P14598 390 aaPredicted RBP14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 CALB2P22676 271 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 CCR1P32246 355 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 PBX1P40424 430 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 MARCKSL1P49006 195 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 DGKZQ13574 1117 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 CSHL1Q14406 222 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 KRT72Q14CN4 511 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 SPDYE7PQ495Y7 208 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 FKBP9P1Q75LS8 142 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 ZNF555Q8NEP9 628 aa14.67□□□□□ -0.06
PCDHB16-201ENST00000609684 C17orf80Q9BSJ5 609 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms