RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 SETD7Q8WTS6 366 aaKnown RBP14.15□□□□□ -0.14
CTSA-212ENST00000606394 XPO6Q96QU8 1125 aaKnown RBP14.15□□□□□ -0.14
CTSA-212ENST00000606394 UBL7Q96S82 380 aaPredicted RBP14.15□□□□□ -0.14
CTSA-212ENST00000606394 PDE11AQ9HCR9 933 aa14.15□□□□□ -0.14
CTSA-212ENST00000606394 OLFML3Q9NRN5 406 aa14.15□□□□□ -0.14
CTSA-212ENST00000606394 INTS13Q9NVM9 706 aa14.15□□□□□ -0.14
CTSA-212ENST00000606394 ZKSCAN5Q9Y2L8 839 aa14.15□□□□□ -0.14
CTSA-212ENST00000606394 PCDHB13Q9Y5F0 798 aa14.15□□□□□ -0.14
CTSA-212ENST00000606394 GOLGA6L6A8MZA4 724 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 TULP1O00294 542 aaPredicted RBP14.14□□□□□ -0.15
CTSA-212ENST00000606394 FLRT2O43155 660 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 CACNG3O60359 315 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 CUTAO60888 179 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 TACC1O75410 805 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 TNNC2P02585 160 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 TPM3P06753 285 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 CMA1P23946 247 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 GNL1P36915 607 aaPredicted RBP14.14□□□□□ -0.15
CTSA-212ENST00000606394 KCNA1Q09470 495 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 MDH1BQ5I0G3 518 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 SCARA3Q6AZY7 606 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 HS2ST1Q7LGA3 356 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 TMEM25Q86YD3 366 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 BBS7Q8IWZ6 715 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 SCFD1Q8WVM8 642 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 FBXO32Q969P5 355 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 MMS19Q96T76 1030 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 SNX25Q9H3E2 840 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 DNAJC17Q9NVM6 304 aaKnown RBP14.14□□□□□ -0.15
CTSA-212ENST00000606394 ANO10Q9NW15 660 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 TOR4AQ9NXH8 423 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 MARK1Q9P0L2 795 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 WDR35Q9P2L0 1181 aa14.14□□□□□ -0.15
CTSA-212ENST00000606394 MEI4A8MW99 385 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 NPC1O15118 1278 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 CILPO75339 1184 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 PTPN1P18031 435 aaKnown RBP14.13□□□□□ -0.15
CTSA-212ENST00000606394 MATKP42679 507 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 WASP42768 502 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 SUZ12Q15022 739 aaKnown RBP14.13□□□□□ -0.15
CTSA-212ENST00000606394 HTR3DQ70Z44 454 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 SYCP3Q8IZU3 236 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 PDCD7Q8N8D1 485 aaKnown RBP14.13□□□□□ -0.15
CTSA-212ENST00000606394 LSM14AQ8ND56 463 aaKnown RBP14.13□□□□□ -0.15
CTSA-212ENST00000606394 ZSWIM2Q8NEG5 633 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 ACOX2Q99424 681 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 CBX8Q9HC52 389 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 TM7SF3Q9NS93 570 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 COMMD8Q9NX08 183 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 WSB2Q9NYS7 404 aaPredicted RBP14.13□□□□□ -0.15
CTSA-212ENST00000606394 IL37Q9NZH6 218 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 STK17AQ9UEE5 414 aa14.13□□□□□ -0.15
CTSA-212ENST00000606394 FAM92AA1XBS5 289 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 TRABD2BA6NFA1 517 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 GCNT3O95395 438 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 NCAM1P13591 858 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 MAOBP27338 520 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 OXTRP30559 389 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 ZNF165P49910 485 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 CYP4F3Q08477 520 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 CAMK2BQ13554 666 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 E2F5Q15329 346 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 CEP57L1Q8IYX8 460 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 GPD1LQ8N335 351 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 TOE1Q96GM8 510 aaKnown RBP14.12□□□□□ -0.15
CTSA-212ENST00000606394 TIGD1Q96MW7 591 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 CBWD1Q9BRT8 395 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 NAT10Q9H0A0 1025 aaKnown RBP14.12□□□□□ -0.15
CTSA-212ENST00000606394 GAREM1Q9H706 876 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 ITM2CQ9NQX7 267 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 TMEM30AQ9NV96 361 aa14.12□□□□□ -0.15
CTSA-212ENST00000606394 USP36Q9P275 1121 aaKnown RBP14.12□□□□□ -0.15
CTSA-212ENST00000606394 A0A1B0GVL5 298 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 GOLGA8IPA6NC78 632 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 ZNF233A6NK53 670 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 GOLGA8JA6NMD2 632 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 PRRT4C9JH25 899 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 GOLGA6L19H0YKK7 550 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 TRIM24O15164 1050 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 BCAT2O15382 392 aaPredicted RBP14.11□□□□□ -0.15
CTSA-212ENST00000606394 ZDHHC11BP0C7U3 371 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 TYRP14679 529 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 PFKFB1P16118 471 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 ABCG1P45844 678 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 NDUFA8P51970 172 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 CACNA2D1P54289 1103 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 IFRD2Q12894 506 aaPredicted RBP14.11□□□□□ -0.15
CTSA-212ENST00000606394 STARD3Q14849 445 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 SMAD1Q15797 465 aaKnown RBP14.11□□□□□ -0.15
CTSA-212ENST00000606394 KIAA1324Q6UXG2 1013 aaKnown RBP14.11□□□□□ -0.15
CTSA-212ENST00000606394 DYMQ7RTS9 669 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 WDR49Q8IV35 697 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 ZCCHC9Q8N567 271 aaKnown RBP14.11□□□□□ -0.15
CTSA-212ENST00000606394 B3GALNT2Q8NCR0 500 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 OR5B17Q8NGF7 314 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 OR6B3Q8NGW1 331 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 RHBDD1Q8TEB9 315 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 FAM84AQ96KN4 292 aa14.11□□□□□ -0.15
CTSA-212ENST00000606394 MRPL45Q9BRJ2 306 aaKnown RBP14.11□□□□□ -0.15
CTSA-212ENST00000606394 BBS2Q9BXC9 721 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms