RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 AMPD1P23109 780 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 FBXO47Q5MNV8 452 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SWT1Q5T5J6 900 aaKnown RBP12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 KCNT2Q6UVM3 1135 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 RGS9BPQ6ZS82 235 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CDHR3Q6ZTQ4 885 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ASRGL1Q7L266 308 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TTC17Q96AE7 1141 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PTPN18Q99952 460 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PLCD4Q9BRC7 762 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CEP41Q9BYV8 373 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PPCSQ9HAB8 311 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PLEKHA5Q9HAU0 1116 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ARHGEF3Q9NR81 526 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SMYD2Q9NRG4 433 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MAD1L1Q9Y6D9 718 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PLXNB2O15031 1838 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 KPNA7A9QM74 516 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CLDN5O00501 218 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DPYSL4O14531 572 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TREHO43280 583 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UNC5CO95185 931 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DARSP14868 501 aaKnown RBP12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ACAT1P24752 427 aaKnown RBP12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TKTP29401 623 aaKnown RBP12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BMPR2Q13873 1038 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 STILQ15468 1287 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TRMT10BQ6PF06 316 aaKnown RBP12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ALKAL1Q6UXT8 129 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TTC39CQ8N584 583 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 RFWD2Q8NHY2 731 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 C10orf82Q8WW14 230 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 FAM149B1Q96BN6 582 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 L3MBTL3Q96JM7 780 aaPredicted RBP12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TBCBQ99426 244 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PHACTR1Q9C0D0 580 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 FETUBQ9UGM5 382 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 AP4E1Q9UPM8 1137 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 USH1CQ9Y6N9 552 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 C2orf71A6NGG8 1288 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 A6NJR5 290 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TRIM49D1C9J1S8 452 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 C1QAP02745 245 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GOT1P17174 413 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TGM2P21980 687 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 GRB14Q14449 540 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SETDB1Q15047 1291 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ANKRD52Q8NB46 1076 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ARRDC4Q8NCT1 418 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TEKT4Q8WW24 435 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 KCTD15Q96SI1 283 aaPredicted RBP12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 LGMNQ99538 433 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 KLC2Q9H0B6 622 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MANSC1Q9H8J5 431 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 POPDC2Q9HBU9 364 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TTLL3Q9Y4R7 772 aa12.24□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 A0A0G2JND7 137 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MDM4O15151 490 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BEST1O76090 585 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CRADDP78560 199 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SH2D5Q6ZV89 423 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MTDHQ86UE4 582 aaKnown RBP12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UNC5BQ8IZJ1 945 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 AGAP11Q8TF27 550 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UTP4Q969X6 686 aaKnown RBP12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CSPG4P5Q96PW8 444 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZNF670Q9BS34 389 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC13A1Q9BZW2 595 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZSWIM8A7E2V4 1837 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 IQANK1A0A1B0GTG1 560 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BCLAF3A2AJT9 711 aaKnown RBP12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC15A5A6NIM6 579 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 T-ENOLP0DO92 83 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NEFHP12036 1026 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 HOXD8P13378 290 aaPredicted RBP12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BGNP21810 368 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NDUFV1P49821 464 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BEX3Q00994 111 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 BST2Q10589 180 aaKnown RBP12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZNF467Q7Z7K2 595 aaPredicted RBP12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 LRRC52Q8N7C0 313 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 MECRQ9BV79 373 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CYLDQ9NQC7 956 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CNTN3Q9P232 1028 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 KANSL3Q9P2N6 904 aa12.23□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SMAPO00193 183 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 PIRO00625 290 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TOP3BO95985 862 aaKnown RBP12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 CCNB1P14635 433 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SNX17Q15036 470 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 DPYSL2Q16555 572 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ACCSLQ4AC99 568 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 TAF1BQ53T94 588 aaPredicted RBP12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 OLFML2BQ68BL8 750 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 UNC5AQ6ZN44 842 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 ZNF534Q76KX8 674 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 SLC26A9Q7LBE3 791 aa12.22□□□□□ -0.45
HMGN3-AS1-201ENST00000604516 NLRP9Q7RTR0 991 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms