RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	OSER1	Q9NX31	292 aa		13.61	□□□□□ -0.23
SRRM1-223	ENST00000600523	NOCT	Q9UK39	431 aa	Known RBP	13.61	□□□□□ -0.23
SRRM1-223	ENST00000600523	NUDT5	Q9UKK9	219 aa		13.61	□□□□□ -0.23
SRRM1-223	ENST00000600523	HBS1L	Q9Y450	684 aa	Known RBP	13.61	□□□□□ -0.23
SRRM1-223	ENST00000600523	OBSL1	O75147	1896 aa		13.61	□□□□□ -0.23
SRRM1-223	ENST00000600523	MYO16	Q9Y6X6	1858 aa		13.61	□□□□□ -0.23
SRRM1-223	ENST00000600523	DENND4C	Q5VZ89	1909 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	SLC12A8	A0AV02	714 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	PAPSS1	O43252	624 aa	Predicted RBP	13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	GBP1	P32455	592 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	ZBED6	P86452	979 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	KLHL30	Q0D2K2	578 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	FBXL6	Q8N531	539 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	SLC20A1	Q8WUM9	679 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	CPLX3	Q8WVH0	158 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	BAP1	Q92560	729 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	NDRG1	Q92597	394 aa	Known RBP	13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	SYN2	Q92777	582 aa	Predicted RBP	13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	ASIC4	Q96FT7	647 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	LRRC3B	Q96PB8	259 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	CPXM1	Q96SM3	734 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	AGPAT1	Q99943	283 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	KLF16	Q9BXK1	252 aa	Predicted RBP	13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	ASNSD1	Q9NWL6	643 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	AIPL1	Q9NZN9	384 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	WNT6	Q9Y6F9	365 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523		A0A0C4DFX4	3053 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	BDP1	A6H8Y1	2624 aa		13.6	□□□□□ -0.23
SRRM1-223	ENST00000600523	KANSL1L	A0AUZ9	987 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	ANKRD62	A6NC57	917 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	FAM86C2P	A6NEL3	165 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	MDM4	O15151	490 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	DES	P17661	470 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	CHKA	P35790	457 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	PBX1	P40424	430 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	PGF	P49763	221 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	STARD6	P59095	220 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	NOMO3	P69849	1222 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	CDK17	Q00537	523 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	FMO1	Q01740	532 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	SLC6A3	Q01959	620 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	PREPL	Q4J6C6	727 aa	Predicted RBP	13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	PTPN20	Q4JDL3	420 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	TDRD12	Q587J7	1177 aa	Known RBP	13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	DCAF6	Q58WW2	860 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	NUGGC	Q68CJ6	796 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	MSANTD2	Q6P1R3	559 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	SARM1	Q6SZW1	724 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	HTR3D	Q70Z44	454 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	UNC45B	Q8IWX7	931 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	WDTC1	Q8N5D0	677 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	CLEC4C	Q8WTT0	213 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	CPA5	Q8WXQ8	436 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	SERPINB11	Q96P15	392 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	ECT2	Q9H8V3	914 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	TBC1D17	Q9HA65	648 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	RRN3	Q9NYV6	651 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	GTSE1	Q9NYZ3	720 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	WDR35	Q9P2L0	1181 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	CYTH4	Q9UIA0	394 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	STAP1	Q9ULZ2	295 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	CAPN11	Q9UMQ6	739 aa		13.59	□□□□□ -0.23
SRRM1-223	ENST00000600523	VCAN	P13611	3396 aa		13.58	□□□□□ -0.23
SRRM1-223	ENST00000600523	ANAPC1	Q9H1A4	1944 aa		13.58	□□□□□ -0.23
SRRM1-223	ENST00000600523	SPECC1L-ADORA2A	F8WAN1	911 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	ARNTL	O00327	626 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	ERBB2	P04626	1255 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	CYP1A1	P04798	512 aa	Predicted RBP	13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	CALB1	P05937	261 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	HMBS	P08397	361 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	SCNN1A	P37088	669 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	SLC11A2	P49281	568 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	CLCN5	P51795	746 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	TNK2	Q07912	1038 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	MTA1	Q13330	715 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	NNT	Q13423	1086 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	UBXN2B	Q14CS0	331 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	CLEC16A	Q2KHT3	1053 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	EML3	Q32P44	896 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	TRIM68	Q6AZZ1	485 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	NUDT18	Q6ZVK8	323 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	FAM183BP	Q6ZVS7	135 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	SLC26A9	Q7LBE3	791 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	CCDC26	Q8TAB7	109 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	TTC8	Q8TAM2	541 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	FAM3C	Q92520	227 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	ZFR	Q96KR1	1074 aa	Known RBP	13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	DDX50	Q9BQ39	737 aa	Known RBP	13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	TTYH3	Q9C0H2	523 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	FAM204A	Q9H8W3	233 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	ADAM22	Q9P0K1	906 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	SLC12A6	Q9UHW9	1150 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	SIT1	Q9Y3P8	196 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	PAXBP1	Q9Y5B6	917 aa		13.58	□□□□□ -0.24
SRRM1-223	ENST00000600523	KRBA1	A5PL33	1030 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	GABBR2	O75899	941 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms