RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 LACTBL1A8MY62 500 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 PES1O00541 588 aaKnown RBP11.09□□□□□ -0.63
SMG9-207ENST00000598860 PPM1BO75688 479 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 TRIM49P0CI25 452 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 TRIM49CP0CI26 452 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 CYP3A5P20815 502 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 AKAP5P24588 427 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 MLH1P40692 756 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 ZACNQ401N2 412 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 YOD1Q5VVQ6 348 aaPredicted RBP11.09□□□□□ -0.63
SMG9-207ENST00000598860 BEST2Q8NFU1 509 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 SPPL3Q8TCT6 385 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 PLEKHO2Q8TD55 490 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 IQCDQ96DY2 449 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 CASD1Q96PB1 797 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 TRIM5Q9C035 493 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 VPS16Q9H269 839 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 IFNKQ9P0W0 207 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 DAAM1Q9Y4D1 1078 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 U3KQE9 123 aa11.09□□□□□ -0.63
SMG9-207ENST00000598860 CCDC163A0A0D9SF12 145 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 SMIM28A0A1B0GU29 152 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 A0A1W2PQC6 194 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 ARL5CA6NH57 179 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 HYAL3O43820 417 aaPredicted RBP11.08□□□□□ -0.64
SMG9-207ENST00000598860 ITGB1P05556 798 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 THP07101 528 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 LAG3P18627 525 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 L1CAMP32004 1257 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 DLG4P78352 724 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 TFAMQ00059 246 aaKnown RBP11.08□□□□□ -0.64
SMG9-207ENST00000598860 TFF2Q03403 129 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 PPP3CAQ08209 521 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 C1orf220Q5T0J3 134 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 JADE1Q6IE81 842 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 GBP6Q6ZN66 633 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 C15orf39Q6ZRI6 1047 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 EFCAB13Q8IY85 973 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 COLGALT1Q8NBJ5 622 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 CCDC150Q8NCX0 1101 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 BVESQ8NE79 360 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 ADCY4Q8NFM4 1077 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 LPPQ93052 612 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 KISS1RQ969F8 398 aaPredicted RBP11.08□□□□□ -0.64
SMG9-207ENST00000598860 ERGIC2Q96RQ1 377 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 GAD1Q99259 594 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 CDC6Q99741 560 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 IMPG2Q9BZV3 1241 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 BRINP2Q9C0B6 783 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 XPO4Q9C0E2 1151 aaKnown RBP11.08□□□□□ -0.64
SMG9-207ENST00000598860 NSUN3Q9H649 340 aaKnown RBP11.08□□□□□ -0.64
SMG9-207ENST00000598860 CWH43Q9H720 699 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 PCMTD2Q9NV79 361 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 FBXL21Q9UKT6 434 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 ITGA11Q9UKX5 1188 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 COQ4Q9Y3A0 265 aa11.08□□□□□ -0.64
SMG9-207ENST00000598860 MYH10P35580 1976 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 hCG_2014768A0A024R1R8 64 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 PTGESO14684 152 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 MEFVO15553 781 aaPredicted RBP11.07□□□□□ -0.64
SMG9-207ENST00000598860 NCK2O43639 380 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 ZC3H11AO75152 810 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMG9-207ENST00000598860 OFD1O75665 1012 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 C4BPAP04003 597 aaKnown RBP11.07□□□□□ -0.64
SMG9-207ENST00000598860 PAX3P23760 479 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 LRPAP1P30533 357 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 GCLMP48507 274 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 UBXN1Q04323 297 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 UBE3AQ05086 875 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 BIRC3Q13489 604 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 TRPC3Q13507 836 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 NR1I3Q14994 352 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 ZBTB6Q15916 424 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 MSMPQ1L6U9 139 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 TCEAL5Q5H9L2 206 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 NOMO2Q5JPE7 1267 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 FAM209AQ5JX71 171 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 CLLU1OSQ5K130 101 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.07□□□□□ -0.64
SMG9-207ENST00000598860 LRRC43Q8N309 656 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 FBXL13Q8NEE6 735 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 POF1BQ8WVV4 589 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 TAF4BQ92750 862 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 PPP2R3CQ969Q6 453 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 FAXDC2Q96IV6 333 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 UROC1Q96N76 676 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 PPP1R10Q96QC0 940 aaKnown RBP11.07□□□□□ -0.64
SMG9-207ENST00000598860 MTMR12Q9C0I1 747 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 MMRN2Q9H8L6 949 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 DPP3Q9NY33 737 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 GCNT4Q9P109 453 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 PUF60Q9UHX1 559 aaKnown RBP11.07□□□□□ -0.64
SMG9-207ENST00000598860 PLAAQ9Y263 795 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 TSC2P49815 1807 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 ITIH6Q6UXX5 1313 aa11.07□□□□□ -0.64
SMG9-207ENST00000598860 NCOR1O75376 2440 aa11.06□□□□□ -0.64
SMG9-207ENST00000598860 VWA8A3KMH1 1905 aa11.06□□□□□ -0.64
SMG9-207ENST00000598860 TTC28Q96AY4 2481 aa11.06□□□□□ -0.64
SMG9-207ENST00000598860 TRBV23-1A0A0A0MS06 115 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms