RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 BBS2Q9BXC9 721 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 NMUR1Q9HB89 426 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 GDPD2Q9HCC8 539 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 DNAJC17Q9NVM6 304 aaKnown RBP13.97□□□□□ -0.17
APOC1-209ENST00000592885 BCCIPQ9P287 314 aaKnown RBP eCLIP13.97□□□□□ -0.17
APOC1-209ENST00000592885 NAGPAQ9UK23 515 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 COQ4Q9Y3A0 265 aa13.97□□□□□ -0.17
APOC1-209ENST00000592885 TCRBV21S2A2A0A5A6 115 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 NEDD8-MDP1E9PL57 170 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 TBX18O95935 607 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 TYRP14679 529 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 HNRNPLP14866 589 aaKnown RBP eCLIP13.96□□□□□ -0.17
APOC1-209ENST00000592885 BCKDHBP21953 392 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 NTSR1P30989 418 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 PPP1R2P41236 205 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 PRCPP42785 496 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 RAD23BP54727 409 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 NUCB2P80303 420 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 COG7P83436 770 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 RAB41Q5JT25 222 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 LPCAT2Q7L5N7 544 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 SCD5Q86SK9 330 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 TTC30AQ86WT1 665 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 SMYD4Q8IYR2 804 aaPredicted RBP13.96□□□□□ -0.17
APOC1-209ENST00000592885 NAT16Q8N8M0 369 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 SLC4A11Q8NBS3 891 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 SEMA4DQ92854 862 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 HEXIM2Q96MH2 286 aaKnown RBP13.96□□□□□ -0.17
APOC1-209ENST00000592885 TIGD1Q96MW7 591 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 DCLK3Q9C098 648 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 SMOC1Q9H4F8 434 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 RXFP3Q9NSD7 469 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 EVLQ9UI08 416 aaPredicted RBP13.96□□□□□ -0.17
APOC1-209ENST00000592885 SDK1Q7Z5N4 2213 aa13.96□□□□□ -0.17
APOC1-209ENST00000592885 SPTBN2O15020 2390 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 ANTXRLA6NF34 631 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 GFRA2O00451 464 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 KHNYNO15037 678 aaKnown RBP13.95□□□□□ -0.18
APOC1-209ENST00000592885 STC2O76061 302 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 HOXB2P14652 356 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 HOXD12P35452 270 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 CHKAP35790 457 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 STIM1Q13586 685 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 E2F5Q15329 346 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 ZNF394Q53GI3 561 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 DCAF17Q5H9S7 520 aaPredicted RBP13.95□□□□□ -0.18
APOC1-209ENST00000592885 EMC10Q5UCC4 262 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 TCERG1LQ5VWI1 586 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 TCEAL6Q6IPX3 200 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 SDE2Q6IQ49 451 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 SLC36A4Q6YBV0 504 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 ELOA2Q8IYF1 753 aaPredicted RBP13.95□□□□□ -0.18
APOC1-209ENST00000592885 ANKRD52Q8NB46 1076 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 ENGASEQ8NFI3 743 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 HMGB4Q8WW32 186 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 TCEAL3Q969E4 200 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 SMARCE1Q969G3 411 aa13.95□□□□□ -0.18
APOC1-209ENST00000592885 LSM14BQ9BX40 385 aaKnown RBP13.95□□□□□ -0.18
APOC1-209ENST00000592885 MYO18AQ92614 2054 aaKnown RBP13.94□□□□□ -0.18
APOC1-209ENST00000592885 LNP1A1A4G5 178 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 NPC1O15118 1278 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 ZBTB24O43167 697 aaPredicted RBP13.94□□□□□ -0.18
APOC1-209ENST00000592885 PENKP01210 267 aaPredicted RBP13.94□□□□□ -0.18
APOC1-209ENST00000592885 TBXAS1P24557 533 aaPredicted RBP13.94□□□□□ -0.18
APOC1-209ENST00000592885 DHPSP49366 369 aaPredicted RBP13.94□□□□□ -0.18
APOC1-209ENST00000592885 DGKGP49619 791 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 BCAT1P54687 386 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 CUL2Q13617 745 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 MAP7D1Q3KQU3 841 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 CBWD6Q4V339 395 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 CBWD3Q5JTY5 395 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 CBWD5Q5RIA9 395 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 DAB2IPQ5VWQ8 1189 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 PEAR1Q5VY43 1037 aaPredicted RBP13.94□□□□□ -0.18
APOC1-209ENST00000592885 TPGS1Q6ZTW0 290 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 PIGZQ86VD9 579 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 PGBD3Q8N328 593 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 ARID3AQ99856 593 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 GABRG3Q99928 467 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 METTL14Q9HCE5 456 aaKnown RBP13.94□□□□□ -0.18
APOC1-209ENST00000592885 OLA1Q9NTK5 396 aaKnown RBP13.94□□□□□ -0.18
APOC1-209ENST00000592885 HESX1Q9UBX0 185 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 ARMCX3Q9UH62 379 aaPredicted RBP13.94□□□□□ -0.18
APOC1-209ENST00000592885 RASAL2Q9UJF2 1139 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 FBXO10Q9UK96 956 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 STRIP2Q9ULQ0 834 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 INVSQ9Y283 1065 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 SLC27A6Q9Y2P4 619 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 ABCA7Q8IZY2 2146 aa13.94□□□□□ -0.18
APOC1-209ENST00000592885 PSMA7O14818 248 aa13.93□□□□□ -0.18
APOC1-209ENST00000592885 XPO1O14980 1071 aaKnown RBP13.93□□□□□ -0.18
APOC1-209ENST00000592885 MDM4O15151 490 aa13.93□□□□□ -0.18
APOC1-209ENST00000592885 PMM2O15305 246 aa13.93□□□□□ -0.18
APOC1-209ENST00000592885 MAP3K13O43283 966 aa13.93□□□□□ -0.18
APOC1-209ENST00000592885 AP5Z1O43299 807 aa13.93□□□□□ -0.18
APOC1-209ENST00000592885 ZNF217O75362 1048 aa13.93□□□□□ -0.18
APOC1-209ENST00000592885 GABRG2P18507 467 aa13.93□□□□□ -0.18
APOC1-209ENST00000592885 ZNF132P52740 706 aa13.93□□□□□ -0.18
APOC1-209ENST00000592885 YWHAGP61981 247 aaKnown RBP eCLIP13.93□□□□□ -0.18
APOC1-209ENST00000592885 BST2Q10589 180 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms