RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 RSRC2Q7L4I2 434 aaKnown RBP15.83■□□□□ 0.12
DDX39A-211ENST00000590239 PEX26Q7Z412 305 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 BNIPLQ7Z465 357 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 TMEM150AQ86TG1 271 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 NT5DC3Q86UY8 548 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 ZNF707Q96C28 371 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-211ENST00000590239 PGAP3Q96FM1 320 aaPredicted RBP15.83■□□□□ 0.12
DDX39A-211ENST00000590239 WDR24Q96S15 920 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 TBCBQ99426 244 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 SMOC2Q9H3U7 446 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 GOLPH3Q9H4A6 298 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 IGFLR1Q9H665 355 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 AMFRQ9UKV5 643 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 JRKLQ9Y4A0 524 aa15.83■□□□□ 0.12
DDX39A-211ENST00000590239 MYO9BQ13459 2157 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 MIF4GDA9UHW6 222 aaKnown RBP15.82■□□□□ 0.12
DDX39A-211ENST00000590239 SPOPO43791 374 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 GLP2RO95838 553 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 IGLV3-25P01717 112 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 HOXB8P17481 243 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-211ENST00000590239 GBP1P32455 592 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 SULT1E1P49888 294 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 RBM10P98175 930 aaKnown RBP15.82■□□□□ 0.12
DDX39A-211ENST00000590239 ATP11AP98196 1134 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 ADAM15Q13444 863 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 ADGRE1Q14246 886 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 C15orf59Q2T9L4 293 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-211ENST00000590239 HECTD3Q5T447 861 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 MEI1Q5TIA1 1274 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 LRRC38Q5VT99 294 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 CC2D1AQ6P1N0 951 aaPredicted RBP15.82■□□□□ 0.12
DDX39A-211ENST00000590239 KLHDC10Q6PID8 442 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 HS6ST3Q8IZP7 471 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 DQX1Q8TE96 717 aaKnown RBP15.82■□□□□ 0.12
DDX39A-211ENST00000590239 FAM172AQ8WUF8 416 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 CD101Q93033 1021 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 LRCH3Q96II8 777 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 GCNAQ96QF7 691 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 CORO1BQ9BR76 489 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 USTQ9Y2C2 406 aa15.82■□□□□ 0.12
DDX39A-211ENST00000590239 SOBPA7XYQ1 873 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 M0QYT0 321 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 TLR5O60602 858 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 LRCH4O75427 683 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 TADA3O75528 432 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 TRUB2O95900 331 aaKnown RBP15.81■□□□□ 0.12
DDX39A-211ENST00000590239 FTCDO95954 541 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 MYL4P12829 197 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 PFKLP17858 780 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 TFE3P19532 575 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-211ENST00000590239 GABRR2P28476 465 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 RDXP35241 583 aaKnown RBP15.81■□□□□ 0.12
DDX39A-211ENST00000590239 HDAC4P56524 1084 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 NNTQ13423 1086 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 COL19A1Q14993 1142 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 C10orf120Q5SQS8 335 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 SH3PXD2AQ5TCZ1 1133 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 OTUD1Q5VV17 481 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-211ENST00000590239 ANKRD54Q6NXT1 300 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 SYT10Q6XYQ8 523 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 GAREM2Q75VX8 874 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 TAC4Q86UU9 113 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 ARFGAP1Q8N6T3 406 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 SMG7Q92540 1137 aaKnown RBP15.81■□□□□ 0.12
DDX39A-211ENST00000590239 MRPS31Q92665 395 aaKnown RBP15.81■□□□□ 0.12
DDX39A-211ENST00000590239 GAS2L1Q99501 681 aaPredicted RBP15.81■□□□□ 0.12
DDX39A-211ENST00000590239 FAM204AQ9H8W3 233 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 DDIT4Q9NX09 232 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 DNMT3BQ9UBC3 853 aaKnown RBP15.81■□□□□ 0.12
DDX39A-211ENST00000590239 DNAI1Q9UI46 699 aa15.81■□□□□ 0.12
DDX39A-211ENST00000590239 CCDC66A2RUB6 948 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 CTAGE9A4FU28 777 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 ZNF197O14709 1029 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 LINC01565O15544 149 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 PSTPIP1O43586 416 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 OAS1P00973 400 aaKnown RBP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 RHOP08100 348 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 TNNT1P13805 278 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 CTNNA2P26232 953 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 MIPP30301 263 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 CTNNA1P35221 906 aaKnown RBP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 ATP5C1P36542 298 aaKnown RBP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 CXCR3P49682 368 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 KPNA1P52294 538 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 PITX1P78337 314 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 DEUP1Q05D60 604 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 EIF4EBP2Q13542 120 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 RPS6KA1Q15418 735 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 HADHQ16836 314 aaKnown RBP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 CDO1Q16878 200 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 CTC1Q2NKJ3 1217 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 PDZD4Q76G19 769 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 SND1Q7KZF4 910 aaKnown RBP eCLIP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 POLNQ7Z5Q5 900 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 CPNE8Q86YQ8 564 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 RHOT1Q8IXI2 618 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 C12orf76Q8N812 135 aaPredicted RBP15.8■□□□□ 0.12
DDX39A-211ENST00000590239 HES6Q96HZ4 224 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 SERPINB11Q96P15 392 aa15.8■□□□□ 0.12
DDX39A-211ENST00000590239 NAPGQ99747 312 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms