RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 KMT2BQ9UMN6 2715 aaPredicted RBP18.89■□□□□ 0.62
PRKCSH-211ENST00000590098 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 STX10O60499 249 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 GREM1O60565 184 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 KCNK5O95279 499 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 HOXB2P14652 356 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 TYRP14679 529 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 NTSR1P30989 418 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 KIF11P52732 1056 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 EDRF1Q3B7T1 1238 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 ZNF394Q53GI3 561 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 PPP1R26Q5T8A7 1209 aaPredicted RBP18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 TMEFF1Q8IYR6 380 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 FAXDC2Q96IV6 333 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.89■□□□□ 0.612e-8■□□□□ 9.8
PRKCSH-211ENST00000590098 NUDT5Q9UKK9 219 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 STARD13Q9Y3M8 1113 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 PI4KAP42356 2102 aa18.89■□□□□ 0.61
PRKCSH-211ENST00000590098 CEP192Q8TEP8 1941 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 MDM4O15151 490 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 TRIM24O15164 1050 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 CETN3O15182 167 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 CACNG3O60359 315 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 EPB41P11171 864 aaKnown RBP18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 RALAP11233 206 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 MXI1P50539 228 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 MAP7D1Q3KQU3 841 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 ZCWPW2Q504Y3 356 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 SPDYCQ5MJ68 293 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 CCDC186Q7Z3E2 898 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 MIB1Q86YT6 1006 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 FRMD1Q8N878 549 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 FBXL13Q8NEE6 735 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 EEF2KMTQ96G04 330 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 CDK5RAP1Q96SZ6 601 aaKnown RBP18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 TMEM9BQ9NQ34 198 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 CISHQ9NSE2 258 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 MARK1Q9P0L2 795 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 ANGPTL2Q9UKU9 493 aa18.88■□□□□ 0.61
PRKCSH-211ENST00000590098 PATE3B3GLJ2 98 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 DPP6P42658 865 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 WASP42768 502 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 PSAPL1Q6NUJ1 521 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 ARMCX6Q7L4S7 300 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 SMYD4Q8IYR2 804 aaPredicted RBP18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 CHPFQ8IZ52 775 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 ZNF276Q8N554 614 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 SEMA4DQ92854 862 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 TMEM176AQ96HP8 235 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 GDPD2Q9HCC8 539 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 RMND1Q9NWS8 449 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 RAB20Q9NX57 234 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 CLIC5Q9NZA1 410 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 MBD1Q9UIS9 605 aaPredicted RBP18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 ZNF510Q9Y2H8 683 aa18.87■□□□□ 0.61
PRKCSH-211ENST00000590098 TNRC6BQ9UPQ9 1833 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 DGKGP49619 791 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 SLC8A3P57103 927 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 MCCD1P59942 119 aaPredicted RBP18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 IRX4P78413 519 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 COG7P83436 770 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 LMAN2Q12907 356 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 LYSMD4Q5XG99 296 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 EGFLAMQ63HQ2 1017 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 SCD5Q86SK9 330 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 SYT12Q8IV01 421 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 ARHGAP18Q8N392 663 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 BHMTQ93088 406 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 NUSAP1Q9BXS6 441 aaKnown RBP18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 FAM124BQ9H5Z6 455 aaPredicted RBP18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 EVLQ9UI08 416 aaPredicted RBP18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 RASAL2Q9UJF2 1139 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 HCN2Q9UL51 889 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 USP3Q9Y6I4 520 aa18.86■□□□□ 0.61
PRKCSH-211ENST00000590098 AP5Z1O43299 807 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 STC2O76061 302 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 GABRG2P18507 467 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 PMLP29590 882 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 PTGER3P43115 390 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 NOVA1P51513 510 aaKnown RBP18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 TRIM61Q5EBN2 209 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 TCERG1LQ5VWI1 586 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 SLC36A4Q6YBV0 504 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 Q6ZNB5 142 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 TOGARAM2Q6ZUX3 1019 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 SLC4A11Q8NBS3 891 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 TSG101Q99816 390 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 UBXN6Q9BZV1 441 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 DCLK3Q9C098 648 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 CALCOCO1Q9P1Z2 691 aa18.85■□□□□ 0.61
PRKCSH-211ENST00000590098 A0A1W2PQF6 199 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 GOLGA6L4A6NEF3 574 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 PRRT4C9JH25 899 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 CHKAP35790 457 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 RAD23BP54727 409 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 RPL6Q02878 288 aaKnown RBP18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 EFEMP1Q12805 493 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 PNOCQ13519 176 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 ST3GAL2Q16842 350 aa18.84■□□□□ 0.61
PRKCSH-211ENST00000590098 DCAF17Q5H9S7 520 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms